Feature Extraction
PEFT
Safetensors
embeddings
m6
paper-fulltext-embedding
papers
repository-library
research-library
scientific-papers
t3_paper_text
Instructions to use PeytonT/paper-fulltext-embedding with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- PEFT
How to use PeytonT/paper-fulltext-embedding with PEFT:
Task type is invalid.
- Notebooks
- Google Colab
- Kaggle
Upload repository_library model package
Browse files- README.md +89 -0
- adapter_config.json +37 -0
- adapter_model.safetensors +3 -0
- special_tokens_map.json +7 -0
- tokenizer.json +0 -0
- tokenizer_config.json +58 -0
- trainer_state.json +223 -0
- training_args.bin +3 -0
- vocab.txt +0 -0
README.md
ADDED
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| 1 |
+
---
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| 2 |
+
base_model: allenai/scibert_scivocab_uncased
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| 3 |
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library_name: peft
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pipeline_tag: feature-extraction
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tags:
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- embeddings
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| 7 |
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- m6
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| 8 |
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- paper-fulltext-embedding
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| 9 |
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- papers
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| 10 |
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- repository-library
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| 11 |
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- research-library
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| 12 |
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- scientific-papers
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- t3_paper_text
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---
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# Paper Fulltext Embedding
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Produces embeddings over full paper text for retrieval and clustering tasks.
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## Model Details
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- Artifact type: LoRA adapter
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- Base model: `allenai/scibert_scivocab_uncased`
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- Model ID: `M6`
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- Tier: `T3_paper_text`
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| 26 |
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- Local mirror: `/arxiv/models/repository_library/paper-fulltext-embedding`
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- Source checkpoint: `models/checkpoints/m6`
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This repository is part of the `repository_library` model stack and is mirrored from `/data/repository_library/models/checkpoints` for publication under the `PeytonT` namespace.
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## Intended Use
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- Primary use: Produces embeddings over full paper text for retrieval and clustering tasks.
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- Secondary use: retrieval, ranking, planning, or scientific paper tooling inside the broader Repository Library system, depending on the model family.
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- Out of scope: production safety claims, benchmark claims beyond the bundled experiment config, or use outside the model's narrow training objective without task-specific validation.
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## Training Data
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This package was trained from the following declared datasets or corpus sources:
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- `local/paper_text_2m_dedup_v1`
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- `source:paper_text_parquet`
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## Training Procedure
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- Sources: `paper_text_parquet`
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- Input fields: `title, abstract, text`
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- Target fields: `fulltext_embedding`
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- Max samples: `0`
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- Precision: `bf16`
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| 51 |
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- Objective: `contrastive`
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| 52 |
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- Batch size: `4`
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| 53 |
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- Learning rate: `0.0001`
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| 54 |
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- Max source tokens: `512`
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| 55 |
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- Max target tokens: `128`
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| 56 |
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- Max steps: `1000`
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| 57 |
+
|
| 58 |
+
## Evaluation
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| 59 |
+
|
| 60 |
+
- Declared metrics: `recall_at_10, ndcg_at_10`
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| 61 |
+
- Status: local experiment artifact mirrored for release; external benchmark reporting has not been standardized across the full model family yet.
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| 62 |
+
|
| 63 |
+
## Usage
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| 64 |
+
|
| 65 |
+
```python
|
| 66 |
+
from transformers import AutoModel, AutoTokenizer
|
| 67 |
+
from peft import PeftModel
|
| 68 |
+
|
| 69 |
+
repo_id = "PeytonT/paper-fulltext-embedding"
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| 70 |
+
base_id = "allenai/scibert_scivocab_uncased"
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| 71 |
+
|
| 72 |
+
tokenizer = AutoTokenizer.from_pretrained(repo_id)
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| 73 |
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base = AutoModel.from_pretrained(base_id)
|
| 74 |
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model = PeftModel.from_pretrained(base, repo_id)
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| 75 |
+
```
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| 76 |
+
|
| 77 |
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## Limitations
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| 78 |
+
|
| 79 |
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- These model cards reflect the packaged experiment configs and mirrored checkpoint contents, not an independently audited benchmark sheet.
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| 80 |
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- Some training datasets are local corpora or exported shards, so reproducibility may require access to the surrounding Repository Library data pipeline.
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| 81 |
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- Models in this stack are narrow components of a larger paper-and-repository system and should be validated on downstream tasks before deployment.
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| 82 |
+
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| 83 |
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## Project Context
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| 84 |
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| 85 |
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Repository Library is a research system for indexing, retrieving, aligning, and reasoning over scientific papers, structured paper content, repositories, and cross-domain links between them.
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| 86 |
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| 87 |
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## Contact
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| 88 |
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| 89 |
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Published under `PeytonT` from the local `repository_library` build.
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adapter_config.json
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{
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| 2 |
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"alpha_pattern": {},
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| 3 |
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"auto_mapping": null,
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| 4 |
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"base_model_name_or_path": "allenai/scibert_scivocab_uncased",
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| 5 |
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"bias": "none",
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| 6 |
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"corda_config": null,
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| 7 |
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"eva_config": null,
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| 8 |
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"exclude_modules": null,
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| 9 |
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"fan_in_fan_out": false,
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| 10 |
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"inference_mode": true,
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| 11 |
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"init_lora_weights": true,
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| 12 |
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"layer_replication": null,
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| 13 |
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"layers_pattern": null,
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| 14 |
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"layers_to_transform": null,
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| 15 |
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"loftq_config": {},
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| 16 |
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"lora_alpha": 32,
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| 17 |
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"lora_bias": false,
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| 18 |
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"lora_dropout": 0.05,
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| 19 |
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"megatron_config": null,
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| 20 |
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"megatron_core": "megatron.core",
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| 21 |
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"modules_to_save": null,
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| 22 |
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"peft_type": "LORA",
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| 23 |
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"qalora_group_size": 16,
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| 24 |
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"r": 8,
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| 25 |
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"rank_pattern": {},
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| 26 |
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"revision": null,
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| 27 |
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"target_modules": [
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| 28 |
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"query",
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| 29 |
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"value"
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| 30 |
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],
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| 31 |
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"target_parameters": null,
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| 32 |
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"task_type": "FEATURE_EXTRACTION",
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| 33 |
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"trainable_token_indices": null,
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| 34 |
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"use_dora": false,
|
| 35 |
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"use_qalora": false,
|
| 36 |
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"use_rslora": false
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| 37 |
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}
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adapter_model.safetensors
ADDED
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version https://git-lfs.github.com/spec/v1
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oid sha256:29e8bb9630f550fe53f5762eda60b0d440aa8c768bf2ee28f9828482bf19e1d2
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| 3 |
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size 1186088
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special_tokens_map.json
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{
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"cls_token": "[CLS]",
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| 3 |
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"mask_token": "[MASK]",
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| 4 |
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"pad_token": "[PAD]",
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| 5 |
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"sep_token": "[SEP]",
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| 6 |
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"unk_token": "[UNK]"
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| 7 |
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}
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tokenizer.json
ADDED
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The diff for this file is too large to render.
See raw diff
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tokenizer_config.json
ADDED
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{
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| 2 |
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"added_tokens_decoder": {
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| 3 |
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"0": {
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| 4 |
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"content": "[PAD]",
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| 5 |
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"lstrip": false,
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| 6 |
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"normalized": false,
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| 7 |
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"rstrip": false,
|
| 8 |
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"single_word": false,
|
| 9 |
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"special": true
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| 10 |
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},
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| 11 |
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"101": {
|
| 12 |
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"content": "[UNK]",
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| 13 |
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"lstrip": false,
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| 14 |
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"normalized": false,
|
| 15 |
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"rstrip": false,
|
| 16 |
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"single_word": false,
|
| 17 |
+
"special": true
|
| 18 |
+
},
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| 19 |
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"102": {
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| 20 |
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"content": "[CLS]",
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| 21 |
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"lstrip": false,
|
| 22 |
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"normalized": false,
|
| 23 |
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"rstrip": false,
|
| 24 |
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"single_word": false,
|
| 25 |
+
"special": true
|
| 26 |
+
},
|
| 27 |
+
"103": {
|
| 28 |
+
"content": "[SEP]",
|
| 29 |
+
"lstrip": false,
|
| 30 |
+
"normalized": false,
|
| 31 |
+
"rstrip": false,
|
| 32 |
+
"single_word": false,
|
| 33 |
+
"special": true
|
| 34 |
+
},
|
| 35 |
+
"104": {
|
| 36 |
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"content": "[MASK]",
|
| 37 |
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"lstrip": false,
|
| 38 |
+
"normalized": false,
|
| 39 |
+
"rstrip": false,
|
| 40 |
+
"single_word": false,
|
| 41 |
+
"special": true
|
| 42 |
+
}
|
| 43 |
+
},
|
| 44 |
+
"clean_up_tokenization_spaces": true,
|
| 45 |
+
"cls_token": "[CLS]",
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| 46 |
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"do_basic_tokenize": true,
|
| 47 |
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"do_lower_case": true,
|
| 48 |
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"extra_special_tokens": {},
|
| 49 |
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"mask_token": "[MASK]",
|
| 50 |
+
"model_max_length": 1000000000000000019884624838656,
|
| 51 |
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"never_split": null,
|
| 52 |
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"pad_token": "[PAD]",
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| 53 |
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"sep_token": "[SEP]",
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| 54 |
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"strip_accents": null,
|
| 55 |
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"tokenize_chinese_chars": true,
|
| 56 |
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"tokenizer_class": "BertTokenizer",
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| 57 |
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"unk_token": "[UNK]"
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| 58 |
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}
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trainer_state.json
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