import collections import json import os import datasets _HOMEPAGE = "https://www.kaggle.com/datasets/nataliakhanzhina/pollen20ldet" _LICENSE = "CC BY 4.0" _CITATION = """\ @misc{ pollen20ldet, title = { Combating data incompetence in pollen images detection and classification for pollinosis prevention }, type = { Open Source Dataset }, author = { Khanzhina, Natalia and Filchenkov, Andrey and Minaeva, Natalia and Novoselova, Larisa and Petukhov, Maxim and Kharisova, Irina and Pinaeva, Julia and Zamorin, Georgiy and Putin, Evgeny and Zamyatina, Elena and others}, howpublished = { \\url{ https://www.kaggle.com/datasets/nataliakhanzhina/pollen20ldet } }, url = { https://www.kaggle.com/datasets/nataliakhanzhina/pollen20ldet }, journal = { Computers in biology and medicine }, volume={140}, pages={105064}, publisher = { Elsevier }, year = { 2022 }, } """ ### I want to look at multiple ways to load categories. Pollen has multiple classification levels and is usually classified via latin version of the term _CATEGORIES = [ 'buckwheat', 'clover', 'angelica', 'angelica_garden', 'willow', 'hill_mustard', 'linden', 'meadow_pink', 'alder', 'birch', 'fireweed', 'nettle', 'pigweed', 'plantain', 'sorrel', 'grass', 'pine', 'maple', 'hazel', 'mugwort' ] _ANNOTATION_FILENAME = "_annotations.json" class POLLENDETECTIONConfig(datasets.BuilderConfig): """Builder Config for pollen-detection""" def __init__(self, data_urls, **kwargs): """ BuilderConfig for pollen-detection. Args: data_urls: `dict`, name to url to download the zip file from. **kwargs: keyword arguments forwarded to super. """ super(POLLENDETECTIONConfig, self).__init__(version=datasets.Version("1.0.0"), **kwargs) self.data_urls = data_urls class POLLENDETECTION(datasets.GeneratorBasedBuilder): """pollen-detection object detection dataset""" VERSION = datasets.Version("1.0.0") BUILDER_CONFIGS = [ POLLENDETECTIONConfig( name="full", description="Full version of pollen-detection dataset.", data_urls={ "train": "https://huggingface.co/datasets/Charliesgt/Pollen20LDet/resolve/main/data/train.zip", "valid": "https://huggingface.co/datasets/Charliesgt/Pollen20LDet/resolve/main/data/valid.zip", "test": "https://huggingface.co/datasets/Charliesgt/Pollen20LDet/resolve/main/data/test.zip", }, ), ] def _info(self): features = datasets.Features( { "image_id": datasets.Value("int64"), "image": datasets.Image(), "width": datasets.Value("int32"), "height": datasets.Value("int32"), "objects": datasets.Sequence( { "id": datasets.Value("int64"), "area": datasets.Value("int64"), "bbox": datasets.Sequence(datasets.Value("float32"), length=4), "category": datasets.ClassLabel(names=_CATEGORIES), } ), } ) return datasets.DatasetInfo( features=features, homepage=_HOMEPAGE, citation=_CITATION, license=_LICENSE, ) def _split_generators(self, dl_manager): data_files = dl_manager.download_and_extract(self.config.data_urls) return [ datasets.SplitGenerator( name=datasets.Split.TRAIN, gen_kwargs={ "folder_dir": data_files["train"], }, ), datasets.SplitGenerator( name=datasets.Split.VALIDATION, gen_kwargs={ "folder_dir": data_files["valid"], }, ), datasets.SplitGenerator( name=datasets.Split.TEST, gen_kwargs={ "folder_dir": data_files["test"], }, ), ] def _generate_examples(self, folder_dir): def process_annot(annot, category_id_to_category): return { "id": annot["id"], "area": annot["area"], "bbox": annot["bbox"], "category": category_id_to_category[annot["category_id"]], } image_id_to_image = {} idx = 0 annotation_filepath = os.path.join(folder_dir, _ANNOTATION_FILENAME) with open(annotation_filepath, "r") as f: annotations = json.load(f) category_id_to_category = {category["id"]: category["name"] for category in annotations["categories"]} image_id_to_annotations = collections.defaultdict(list) for annot in annotations["annotations"]: image_id_to_annotations[annot["image_id"]].append(annot) filename_to_image = {image["file_name"]: image for image in annotations["images"]} for filename in os.listdir(folder_dir): filepath = os.path.join(folder_dir, filename) if filename in filename_to_image: image = filename_to_image[filename] objects = [ process_annot(annot, category_id_to_category) for annot in image_id_to_annotations[image["id"]] ] with open(filepath, "rb") as f: image_bytes = f.read() yield idx, { "image_id": image["id"], "image": {"path": filepath, "bytes": image_bytes}, "width": image["width"], "height": image["height"], "objects": objects, } idx += 1