{
  "cluster_count": 59843,
  "commands": {
    "cluster": [
      "/home/ubuntu/av/bin/mmseqs",
      "cluster",
      "/home/ubuntu/av/vocab/mmseqs/sequence_db",
      "/home/ubuntu/av/vocab/mmseqs/cluster_db",
      "/home/ubuntu/av/vocab/mmseqs/tmp",
      "--min-seq-id",
      "0.30",
      "-c",
      "0.50",
      "--cov-mode",
      "0",
      "--alignment-mode",
      "3",
      "--cluster-mode",
      "0",
      "--single-step-clustering",
      "1",
      "--cluster-reassign",
      "1",
      "-s",
      "7.5",
      "--max-seqs",
      "20000",
      "--threads",
      "60",
      "--split-memory-limit",
      "450G"
    ],
    "createdb": [
      "/home/ubuntu/av/bin/mmseqs",
      "createdb",
      "/home/ubuntu/av/data/uniprot_sprot.fasta.gz",
      "/home/ubuntu/av/vocab/mmseqs/sequence_db"
    ],
    "createtsv": [
      "/home/ubuntu/av/bin/mmseqs",
      "createtsv",
      "/home/ubuntu/av/vocab/mmseqs/sequence_db",
      "/home/ubuntu/av/vocab/mmseqs/sequence_db",
      "/home/ubuntu/av/vocab/mmseqs/cluster_db",
      "/home/ubuntu/av/vocab/mmseqs/clusters.tsv"
    ]
  },
  "inputs": {
    "accession_count": 575503,
    "accession_sequences_sha256": "94d46deefd82c66a0f49f8cf7f56da7ed8caa515dcdb88a818806939562ad92d",
    "accessions_sha256": "824e1438cb1cb25583d0359491f53630ec24e76de96b92c92a0b6845b3477abb",
    "fasta_path": "/home/ubuntu/av/data/uniprot_sprot.fasta.gz",
    "fasta_sha256": "b774748a050fd3de0bf2ad49b359ed59a2c2b02c89df3fe0679fafa446751794"
  },
  "outputs": {
    "memberships_path": "/home/ubuntu/av/vocab/mmseqs/clusters.tsv",
    "memberships_sha256": "bb7d5f36e991ba8be0b3c236f4408d69fca214f65ab27ba7cfabce424730afba"
  },
  "parameters": {
    "alignment_mode": 3,
    "binary": "/home/ubuntu/av/bin/mmseqs",
    "cluster_mode": 0,
    "cluster_reassign": true,
    "coverage_mode": 0,
    "expected_version": "eec9c354be4276d2373996af2e50808b1390d527",
    "max_sequences": 20000,
    "min_coverage": 0.5,
    "min_sequence_identity": 0.3,
    "sensitivity": 7.5,
    "single_step_clustering": true,
    "split_memory_limit": "450G",
    "threads": 60
  },
  "schema_version": "annotation-vocabulary-mmseqs-run-manifest-v2",
  "tool": {
    "binary_path": "/home/ubuntu/av/bin/mmseqs",
    "binary_sha256": "6e532c0b639337d070524bf36266b286b59027d487075136d4b8bbe9cf96d7a2",
    "name": "MMseqs2",
    "version": "eec9c354be4276d2373996af2e50808b1390d527"
  }
}