Dataset_id	Raw_file_name	MZML_file_name	#Msalign_files	#MS/MS_spectra	#PrSM_ids	#Proteoform_ids	#Protein_ids	Species	Instrument	Dissociation	Sample	Separation	Cysteine_protection	FAIMS
MSV000093727	Alz_DiffSol_Comp_Mouse1_LH_HFIP_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse1_LH_HFIP_R1_Aragorn_13Feb21_21-01-03.mzML	3	10588	5593	3110	500	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_LH_HFIP_R2_Aragorn_31Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse1_LH_HFIP_R2_Aragorn_31Dec21_21-11-03.mzML	3	10953	6994	4092	673	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_LH_HFIP_R3_Aragorn_28May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse1_LH_HFIP_R3_Aragorn_28May21_21-02-02.mzML	3	11053	7364	3723	638	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_LH_Urea_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse1_LH_Urea_R1_Aragorn_13Feb21_21-01-03.mzML	3	9450	4134	2264	540	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_LH_Urea_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse1_LH_Urea_R2_Aragorn_28Dec21_21-11-03.mzML	3	10603	4141	2232	618	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_LH_Urea_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse1_LH_Urea_R3_Aragorn_27May21_21-02-02.mzML	3	10397	4875	2473	627	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_RH_HFIP_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse1_RH_HFIP_R1_Aragorn_13Feb21_21-01-03.mzML	3	10647	5584	2950	456	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_RH_HFIP_R2_Aragorn_31Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse1_RH_HFIP_R2_Aragorn_31Dec21_21-11-03.mzML	3	10963	6616	3635	542	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_RH_HFIP_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse1_RH_HFIP_R3_Aragorn_27May21_21-02-02.mzML	3	11023	7104	3276	522	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_RH_Urea_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse1_RH_Urea_R1_Aragorn_13Feb21_21-01-03.mzML	3	9265	3838	2111	531	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_RH_Urea_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse1_RH_Urea_R2_Aragorn_28Dec21_21-11-03.mzML	3	10395	3807	2113	595	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse1_RH_Urea_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse1_RH_Urea_R3_Aragorn_27May21_21-02-02.mzML	3	10203	4597	2304	631	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_LH_HFIP_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse2_LH_HFIP_R1_Aragorn_13Feb21_21-01-03.mzML	3	10783	6443	3456	526	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_LH_HFIP_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse2_LH_HFIP_R2_Aragorn_28Dec21_21-11-03.mzML	3	10972	7030	3858	640	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_LH_HFIP_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse2_LH_HFIP_R3_Aragorn_27May21_21-02-02.mzML	3	11150	7693	3737	618	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_LH_Urea_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse2_LH_Urea_R1_Aragorn_13Feb21_21-01-03.mzML	3	9595	4279	2379	609	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_LH_Urea_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse2_LH_Urea_R2_Aragorn_28Dec21_21-11-03.mzML	3	10603	4311	2380	669	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_LH_Urea_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse2_LH_Urea_R3_Aragorn_27May21_21-02-02.mzML	3	10316	4862	2491	637	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_RH_HFIP_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse2_RH_HFIP_R1_Aragorn_13Feb21_21-01-03.mzML	3	10627	6256	3430	541	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_RH_HFIP_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse2_RH_HFIP_R2_Aragorn_28Dec21_21-11-03.mzML	3	10824	6694	3752	620	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_RH_HFIP_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse2_RH_HFIP_R3_Aragorn_27May21_21-02-02.mzML	3	10974	7376	3682	617	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_RH_Urea_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse2_RH_Urea_R1_Aragorn_13Feb21_21-01-03.mzML	3	9602	4498	2552	608	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_RH_Urea_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse2_RH_Urea_R2_Aragorn_28Dec21_21-11-03.mzML	3	10611	4444	2473	666	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse2_RH_Urea_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse2_RH_Urea_R3_Aragorn_27May21_21-02-02.mzML	3	10227	5030	2589	654	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_LH_HFIP_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse3_LH_HFIP_R1_Aragorn_13Feb21_21-01-03.mzML	3	10759	6511	3353	499	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_LH_HFIP_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse3_LH_HFIP_R2_Aragorn_28Dec21_21-11-03.mzML	3	10923	6750	3592	557	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_LH_HFIP_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse3_LH_HFIP_R3_Aragorn_27May21_21-02-02.mzML	3	11107	7571	3620	545	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_LH_Urea_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse3_LH_Urea_R1_Aragorn_13Feb21_21-01-03.mzML	3	9433	4229	2461	595	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_LH_Urea_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse3_LH_Urea_R2_Aragorn_28Dec21_21-11-03.mzML	3	10563	4419	2448	643	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_LH_Urea_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse3_LH_Urea_R3_Aragorn_27May21_21-02-02.mzML	3	10132	4850	2504	629	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_RH_HFIP_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse3_RH_HFIP_R1_Aragorn_13Feb21_21-01-03.mzML	3	10421	6256	3244	488	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_RH_HFIP_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse3_RH_HFIP_R2_Aragorn_28Dec21_21-11-03.mzML	3	10861	6616	3624	586	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_RH_HFIP_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse3_RH_HFIP_R3_Aragorn_27May21_21-02-02.mzML	3	11029	7362	3466	538	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_RH_Urea_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Comp_Mouse3_RH_Urea_R1_Aragorn_13Feb21_21-01-03.mzML	3	9479	4387	2526	579	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_RH_Urea_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Comp_Mouse3_RH_Urea_R2_Aragorn_28Dec21_21-11-03.mzML	3	10562	4606	2539	661	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Comp_Mouse3_RH_Urea_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Comp_Mouse3_RH_Urea_R3_Aragorn_27May21_21-02-02.mzML	3	10090	4987	2553	634	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse1_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Control_Mouse1_R1_Aragorn_13Feb21_21-01-03.mzML	3	9866	5596	3545	742	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse1_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Control_Mouse1_R2_Aragorn_28Dec21_21-11-03.mzML	3	10989	6250	3938	849	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse1_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Control_Mouse1_R3_Aragorn_27May21_21-02-02.mzML	3	10873	6511	3852	838	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse2_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Control_Mouse2_R1_Aragorn_13Feb21_21-01-03.mzML	3	9958	5877	3609	760	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse2_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Control_Mouse2_R2_Aragorn_28Dec21_21-11-03.mzML	3	11009	6332	3916	815	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse2_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Control_Mouse2_R3_Aragorn_27May21_21-02-02.mzML	3	10954	6665	3915	822	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse3_R1_Aragorn_13Feb21_21-01-03.raw	Alz_DiffSol_Control_Mouse3_R1_Aragorn_13Feb21_21-01-03.mzML	3	9919	5820	3587	720	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse3_R2_Aragorn_28Dec21_21-11-03.raw	Alz_DiffSol_Control_Mouse3_R2_Aragorn_28Dec21_21-11-03.mzML	3	11032	6320	3888	810	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
MSV000093727	Alz_DiffSol_Control_Mouse3_R3_Aragorn_27May21_21-02-02.raw	Alz_DiffSol_Control_Mouse3_R3_Aragorn_27May21_21-02-02.mzML	3	10886	6501	3788	798	Mouse	Orbitrap Fusion Lumos	CID	Brain tissue (WT C57BL/6 J)	RPLC	None	Yes
IPX0005864000	data01_Haima_mem_F1.raw	data01_Haima_mem_F1.mzML	1	6419	3044	983	206	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
IPX0005864000	data02_Haima_mem_F2.raw	data02_Haima_mem_F2.mzML	1	6941	3545	1053	234	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
IPX0005864000	data03_Haima_mem_F3.raw	data03_Haima_mem_F3.mzML	1	8128	3941	1026	216	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
IPX0005864000	data04_Haima_mem_F4.raw	data04_Haima_mem_F4.mzML	1	8353	3785	839	210	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
IPX0005864000	data05_Haima_mem_F5.raw	data05_Haima_mem_F5.mzML	1	8288	3549	714	151	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
IPX0005864000	data06_Haima_mem_F6.raw	data06_Haima_mem_F6.mzML	1	9040	3532	649	145	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
IPX0005864000	data07_Haima_mem_F7.raw	data07_Haima_mem_F7.mzML	1	7076	2420	472	122	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
IPX0005864000	data08_Haima_mem_F8.raw	data08_Haima_mem_F8.mzML	1	6965	1691	440	95	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
IPX0005864000	data09_Haima_mem_F9.raw	data09_Haima_mem_F9.mzML	1	6428	1292	447	58	Mouse	Orbitrap Fusion Lumos	HCD	Brain hippocampus	RPLC	None	No
PXD042298	F1_1.raw	F1_1.mzML	1	6655	22	8	4	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
PXD042298	F1_2.raw	F1_2.mzML	1	11824	470	14	7	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
PXD042298	F2_1.raw	F2_1.mzML	1	12357	1632	81	19	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
PXD042298	F2_2.raw	F2_2.mzML	1	12943	3103	99	18	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
PXD042298	F3_1.raw	F3_1.mzML	1	13270	3524	116	34	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
PXD042298	F3_2.raw	F3_2.mzML	1	12808	3779	103	32	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
PXD042298	F4_1.raw	F4_1.mzML	1	4650	448	48	18	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
PXD042298	F4_2.raw	F4_2.mzML	1	5596	571	29	13	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
PXD051505	Mit_Old1_T1.raw	Mit_Old1_T1.mzML	1	3694	633	145	47	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Old1_T2.raw	Mit_Old1_T2.mzML	1	3681	525	125	44	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Old2_T1.raw	Mit_Old2_T1.mzML	1	3604	546	129	44	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Old2_T2.raw	Mit_Old2_T2.mzML	1	3617	538	132	46	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Old3_T1.raw	Mit_Old3_T1.mzML	1	3527	528	134	44	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Old3_T2.raw	Mit_Old3_T2.mzML	1	3469	529	135	43	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Young1_T1.raw	Mit_Young1_T1.mzML	1	7244	1436	284	81	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Young1_T2.raw	Mit_Young1_T2.mzML	1	7343	1458	271	82	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Young2_T1.raw	Mit_Young2_T1.mzML	1	3728	575	135	50	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Young2_T2.raw	Mit_Young2_T2.mzML	1	3767	617	132	49	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Young3_T1.raw	Mit_Young3_T1.mzML	1	3785	594	132	42	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD051505	Mit_Young3_T2.raw	Mit_Young3_T2.mzML	1	3718	576	131	44	Mouse	Orbitrap Exploris 240	HCD	Heart tissue	RPLC	Carbamidomethylation	No
PXD042298	Single_shot_BeforeSEC.raw	Single_shot_BeforeSEC.mzML	1	8472	1063	62	22	Mouse	Q Exactive HF	HCD	Brain	CZE	None	No
MSV000092097	T1D_TD_BC228-3_WT_M_Aragorn_02Apr21_21-02-01.raw	T1D_TD_BC228-3_WT_M_Aragorn_02Apr21_21-02-01.mzML	3	13356	5031	2060	300	Mouse	Orbitrap Fusion Lumos	CID	Mouse pancreatic islet (pancrea beta cells)	RPLC	Carbamidomethylation	Yes
MSV000092097	T1D_TD_BC228-4_KO_M_1_Aragorn_02Apr21_21-02-01.raw	T1D_TD_BC228-4_KO_M_1_Aragorn_02Apr21_21-02-01.mzML	3	13314	5388	2082	342	Mouse	Orbitrap Fusion Lumos	CID	Mouse pancreatic islet (pancrea beta cells)	RPLC	Carbamidomethylation	Yes
MSV000092097	T1D_TD_BC228-4_KO_M_2_Aragorn_02Apr21_21-02-01.raw	T1D_TD_BC228-4_KO_M_2_Aragorn_02Apr21_21-02-01.mzML	3	13368	5765	2365	399	Mouse	Orbitrap Fusion Lumos	CID	Mouse pancreatic islet (pancrea beta cells)	RPLC	Carbamidomethylation	Yes
MSV000092097	T1D_TD_BC228-4_KO_M_3_Aragorn_02Apr21_21-02-01.raw	T1D_TD_BC228-4_KO_M_3_Aragorn_02Apr21_21-02-01.mzML	3	13348	5692	2393	398	Mouse	Orbitrap Fusion Lumos	CID	Mouse pancreatic islet (pancrea beta cells)	RPLC	Carbamidomethylation	Yes
MSV000092097	T1D_TD_BC228-4_KO_M_4_Aragorn_02Apr21_21-02-01.raw	T1D_TD_BC228-4_KO_M_4_Aragorn_02Apr21_21-02-01.mzML	3	13350	5770	2580	417	Mouse	Orbitrap Fusion Lumos	CID	Mouse pancreatic islet (pancrea beta cells)	RPLC	Carbamidomethylation	Yes
MSV000092097	T1D_TD_PE32-3_WT_M_Aragorn_02Apr21_21-02-01.raw	T1D_TD_PE32-3_WT_M_Aragorn_02Apr21_21-02-01.mzML	3	13467	5309	2247	295	Mouse	Orbitrap Fusion Lumos	CID	Mouse pancreatic islet (pancrea beta cells)	RPLC	Carbamidomethylation	Yes
MSV000092097	T1D_TD_PE33-5_WT_F_Aragorn_02Apr21_21-02-01.raw	T1D_TD_PE33-5_WT_F_Aragorn_02Apr21_21-02-01.mzML	3	13582	6408	2153	258	Mouse	Orbitrap Fusion Lumos	CID	Mouse pancreatic islet (pancrea beta cells)	RPLC	Carbamidomethylation	Yes
MSV000092097	T1D_TD_PE33-7_WT_F_Aragorn_02Apr21_21-02-01.raw	T1D_TD_PE33-7_WT_F_Aragorn_02Apr21_21-02-01.mzML	3	13384	5512	2137	258	Mouse	Orbitrap Fusion Lumos	CID	Mouse pancreatic islet (pancrea beta cells)	RPLC	Carbamidomethylation	Yes