"""Standard matplotlib plots for benchmark reports.""" from __future__ import annotations from pathlib import Path from typing import Any import matplotlib.pyplot as plt TASK_METRICS = { "monitoring_step": { "source_task": "monitoring_step", "label": "Step Prediction", "balanced_accuracy": "step_balanced_accuracy", "f1": "step_macro_f1", "precision": "step_macro_precision", "recall": "step_macro_recall", "accuracy": "step_identification_accuracy", "parse_success": "parse_success_rate", }, "monitor_next_step": { "source_task": "monitor_next_step", "label": "Advance Prediction", "balanced_accuracy": "advance_step_balanced_accuracy", "f1": "advance_step_macro_f1", "precision": "advance_step_macro_precision", "recall": "advance_step_macro_recall", "accuracy": "advance_step_accuracy", "parse_success": "parse_success_rate", }, "pmd_detection": { "source_task": "pmd", "label": "Error Detection", "balanced_accuracy": "binary_balanced_accuracy", "f1": "binary_macro_f1", "precision": "binary_macro_precision", "recall": "binary_macro_recall", "accuracy": "binary_accuracy", "parse_success": "parse_success_rate", }, } TASK_LABELS = { "monitoring_step": "Step Prediction", "monitor_next_step": "Advance Prediction", "pmd": "Error Detection", "pmd_detection": "Error Detection", } LSV_BALANCED_PANELS = [ ("monitoring_step", "step_balanced_accuracy", "Protocol Monitoring Step\nPrediction Accuracy"), ("monitor_next_step", "advance_step_balanced_accuracy", "Protocol Monitoring Step\nAdvanced Prediction Accuracy"), ("pmd", "binary_balanced_accuracy", "Error Detection"), ] MODEL_STYLE = { "cosmos_reason": ("Cosmos\nReason", "#6B7280"), "qwen25vl_7b": ("Qwen2.5\n7B", "#8C6D31"), "labos7b_lora750": ("LabOS\nVLM 7B", "#2A7F62"), "qwen25vl_32b": ("Qwen2.5\n32B", "#B08A3C"), "labos32b_lora750": ("LabOS\nVLM 32B", "#1F6B53"), "labos7b_lora750_hf": ("LabOS\nVLM 7B HF", "#2A7F62"), } def _value(summary: dict[str, Any], metric: str) -> float: value = summary.get(metric) return float(value) * 100.0 if isinstance(value, (int, float)) else 0.0 def _sem(summary: dict[str, Any], metric: str) -> float: value = summary.get(f"{metric}_sem") return float(value) * 100.0 if isinstance(value, (int, float)) else 0.0 def _model_style(row: dict[str, Any]) -> tuple[str, str]: key = str(row.get("model_key") or row.get("model_label") or "") label = str(row.get("model_label") or key) if key in MODEL_STYLE: return MODEL_STYLE[key] if label in MODEL_STYLE: return MODEL_STYLE[label] pretty = label.replace("_", "\n") return pretty, "#4F9B7B" def _paper_x_positions(labels: list[str]) -> list[float]: positions: list[float] = [] current = 0.0 previous = "" for idx, label in enumerate(labels): flat_label = label.replace("\n", " ") if idx == 0: current = 0.0 elif "Cosmos" in previous: current += 1.25 elif "32B" in flat_label and "32B" not in previous: current += 1.02 else: current += 0.68 positions.append(current) previous = flat_label return positions def _paper_group_separators(labels: list[str], x: list[float]) -> list[float]: separators: list[float] = [] for idx in range(len(labels) - 1): left = labels[idx].replace("\n", " ") right = labels[idx + 1].replace("\n", " ") if "Cosmos" in left or ("32B" in right and "32B" not in left): separators.append((x[idx] + x[idx + 1]) / 2.0) return separators def plot_lsv_balanced_accuracy(model_results: list[dict[str, Any]], output_path: Path) -> None: output_path.parent.mkdir(parents=True, exist_ok=True) labels: list[str] = [] colors: list[str] = [] for row in model_results: label, color = _model_style(row) labels.append(label) colors.append(color) x = _paper_x_positions(labels) fig, axes = plt.subplots(1, 3, figsize=(9.4, 3.25), sharey=True) for ax, (task_name, metric, title) in zip(axes, LSV_BALANCED_PANELS, strict=True): values = [] errors = [] for row in model_results: summary = row["tasks"].get(task_name, {}) values.append(_value(summary, metric)) errors.append(_sem(summary, metric)) bars = ax.bar( x, values, width=0.66, color=colors, edgecolor="#2F2F2F", linewidth=0.5, yerr=errors, capsize=2.5, error_kw={"elinewidth": 0.8, "capthick": 0.8, "ecolor": "#333333"}, ) for bar, value, error in zip(bars, values, errors, strict=True): ax.text( bar.get_x() + bar.get_width() / 2, value + error + 1.2, f"{value:.0f}", ha="center", va="bottom", fontsize=7, clip_on=False, ) ax.set_title(title, fontsize=10) ax.set_ylim(0, 80) ax.set_xticks(x) ax.set_xticklabels(labels, fontsize=7) for tick in ax.get_xticklabels(): if "LabOS" in tick.get_text(): tick.set_fontweight("bold") for separator in _paper_group_separators(labels, x): ax.axvline(separator, color="#6B7280", linewidth=0.6, alpha=0.35) ax.spines["top"].set_visible(False) ax.spines["right"].set_visible(False) axes[0].set_ylabel(r"Accuracy (%) $\pm$ SEM") fig.suptitle("LSV Benchmark v1", y=0.98, fontsize=11) fig.tight_layout(pad=0.7, rect=(0, 0, 1, 0.95)) fig.savefig(output_path, dpi=220, bbox_inches="tight") plt.close(fig) def plot_grouped_metric( model_results: list[dict[str, Any]], *, metric_kind: str, output_path: Path, ylabel: str, ) -> None: output_path.parent.mkdir(parents=True, exist_ok=True) models = [row["model_label"] for row in model_results] tasks = [ task for task, metrics in TASK_METRICS.items() if any(metrics["source_task"] in row["tasks"] for row in model_results) ] x = list(range(len(tasks))) width = min(0.8 / max(len(models), 1), 0.22) fig, ax = plt.subplots(figsize=(max(6.5, 1.2 * len(tasks) + 0.8 * len(models)), 3.8)) for model_idx, row in enumerate(model_results): offsets = [pos + (model_idx - (len(models) - 1) / 2) * width for pos in x] values = [] errors = [] for task in tasks: task_metrics = TASK_METRICS[task] summary = row["tasks"].get(task_metrics["source_task"], {}) metric = TASK_METRICS[task][metric_kind] values.append(_value(summary, metric)) errors.append(_sem(summary, metric)) ax.bar(offsets, values, width=width, label=row["model_label"], yerr=errors, capsize=2) ax.set_title(f"{metric_kind.replace('_', ' ').title()} Across Tasks") ax.set_ylabel(ylabel) ax.set_ylim(0, 105) ax.set_xticks(x) ax.set_xticklabels([TASK_METRICS[task]["label"] for task in tasks]) ax.legend(fontsize=7) ax.spines["top"].set_visible(False) ax.spines["right"].set_visible(False) fig.tight_layout() fig.savefig(output_path, dpi=220, bbox_inches="tight") plt.close(fig) def plot_composite(model_results: list[dict[str, Any]], output_path: Path) -> None: output_path.parent.mkdir(parents=True, exist_ok=True) labels = [row["model_label"] for row in model_results] values = [] for row in model_results: task_values = [] for _, metrics in TASK_METRICS.items(): source_task = metrics["source_task"] if source_task in row["tasks"]: value = row["tasks"][source_task].get(metrics["balanced_accuracy"]) if isinstance(value, (int, float)): task_values.append(float(value)) values.append((sum(task_values) / len(task_values) * 100.0) if task_values else 0.0) fig, ax = plt.subplots(figsize=(max(5.5, 0.8 * len(labels)), 3.4)) bars = ax.bar(range(len(labels)), values, color="#4F9B7B", edgecolor="#2F2F2F", linewidth=0.5) for bar, value in zip(bars, values, strict=True): ax.text(bar.get_x() + bar.get_width() / 2, value + 1, f"{value:.0f}", ha="center", va="bottom", fontsize=8) ax.set_title("Composite Balanced Accuracy") ax.set_ylabel("Score (%)") ax.set_ylim(0, 105) ax.set_xticks(range(len(labels))) ax.set_xticklabels(labels, rotation=25, ha="right") ax.spines["top"].set_visible(False) ax.spines["right"].set_visible(False) fig.tight_layout() fig.savefig(output_path, dpi=220, bbox_inches="tight") plt.close(fig) def plot_confusion(confusion: dict[str, int], output_path: Path, title: str) -> None: if not confusion: return labels = sorted({part for key in confusion for part in key.split("->", 1)}) matrix = [[confusion.get(f"{target}->{pred}", 0) for pred in labels] for target in labels] output_path.parent.mkdir(parents=True, exist_ok=True) fig, ax = plt.subplots(figsize=(max(4.2, 0.55 * len(labels)), max(3.8, 0.45 * len(labels)))) image = ax.imshow(matrix, cmap="Blues") ax.set_title(title) ax.set_xlabel("Predicted") ax.set_ylabel("Target") ax.set_xticks(range(len(labels))) ax.set_xticklabels(labels, rotation=45, ha="right", fontsize=7) ax.set_yticks(range(len(labels))) ax.set_yticklabels(labels, fontsize=7) for row_idx, row in enumerate(matrix): for col_idx, value in enumerate(row): ax.text(col_idx, row_idx, str(value), ha="center", va="center", fontsize=7) fig.colorbar(image, ax=ax, fraction=0.046, pad=0.04) fig.tight_layout() fig.savefig(output_path, dpi=220, bbox_inches="tight") plt.close(fig) def write_standard_plots(model_results: list[dict[str, Any]], output_dir: Path) -> list[Path]: plots_dir = output_dir / "plots" paths: list[Path] = [] plot_composite(model_results, plots_dir / "composite_balanced_accuracy.png") paths.append(plots_dir / "composite_balanced_accuracy.png") plot_lsv_balanced_accuracy(model_results, plots_dir / "lsv_benchmark_v1_balanced_accuracy.png") paths.append(plots_dir / "lsv_benchmark_v1_balanced_accuracy.png") for metric_kind, ylabel in ( ("balanced_accuracy", "Balanced Accuracy (%)"), ("f1", "F1 (%)"), ("precision", "Macro Precision (%)"), ("recall", "Macro Recall (%)"), ("parse_success", "Parse Success (%)"), ): path = plots_dir / f"{metric_kind}.png" plot_grouped_metric(model_results, metric_kind=metric_kind, output_path=path, ylabel=ylabel) paths.append(path) for row in model_results: safe_model = row["model_label"].replace("/", "_") for task, summary in row["tasks"].items(): confusion = ( summary.get("step_confusion") or summary.get("advance_step_confusion") or summary.get("binary_confusion") or {} ) path = plots_dir / f"{safe_model}_{task}_confusion.png" plot_confusion(confusion, path, f"{row['model_label']} - {TASK_LABELS.get(task, task)} Confusion") if path.exists(): paths.append(path) return paths