#!/bin/bash set -e cd /workspace HF_TOKEN="${HF_TOKEN:-$1}" if [ -z "$HF_TOKEN" ]; then echo "Usage: bash run_all.sh " exit 1 fi REPO="datamatters24/research-document-archive" echo "=== Step 1: Fix torch + install tools ===" pip install -q --upgrade torch torchvision --index-url https://download.pytorch.org/whl/cu124 pip install -q bertopic hdbscan umap-learn plotly safetensors sentence-transformers transformers echo "" echo "=== Step 2: Download data from HuggingFace ===" python -c " from huggingface_hub import snapshot_download snapshot_download('$REPO', repo_type='dataset', allow_patterns='runpod/*', local_dir='.', token='$HF_TOKEN') " mv runpod/* . 2>/dev/null; rmdir runpod 2>/dev/null echo "Files downloaded:" ls -lh embeddings.npz doc_metadata.jsonl 02_bertopic_gpu.py echo "" echo "=== Step 3: GPU check ===" nvidia-smi --query-gpu=name,memory.total --format=csv,noheader python -c "import torch; print(f'PyTorch {torch.__version__}, CUDA {torch.version.cuda}, GPU available: {torch.cuda.is_available()}')" echo "" echo "=== Step 4: Attempting cuML install ===" pip install cuml-cu12 2>/dev/null || pip install cuml-cu11 2>/dev/null || echo "cuML not available, using CPU UMAP" echo "" echo "=== Step 5: Running BERTopic ===" python -u 02_bertopic_gpu.py 2>&1 | tee bertopic.log echo "" echo "=== Step 6: Uploading results ===" python -c " from huggingface_hub import HfApi api = HfApi() import os for f in ['bertopic_results.jsonl', 'topic_info.json', 'umap_coords.npz']: if os.path.exists(f): print(f'Uploading {f}...') api.upload_file(path_or_fileobj=f, path_in_repo=f'runpod/{f}', repo_id='$REPO', repo_type='dataset', token='$HF_TOKEN') print(f' Done') else: print(f'WARNING: {f} not found — BERTopic may have failed') print('Upload complete!') " echo "" echo "=== DONE ==="