""" African Medical Multimodal Dataset Loading Script Easy interface for loading the dataset components """ import json import pandas as pd import numpy as np from pathlib import Path from typing import Dict, List, Tuple, Optional import cv2 class AfricanMedicalDataset: def __init__(self, dataset_path: str = "."): self.dataset_path = Path(dataset_path) self.records = None self.features = None self.splits = None def load_multimodal_records(self) -> List[Dict]: """Load complete multimodal records""" with open(self.dataset_path / "data" / "multimodal_records.json", 'r', encoding='utf-8') as f: self.records = json.load(f) return self.records def load_feature_matrices(self) -> Dict[str, np.ndarray]: """Load ML-ready feature matrices""" self.features = dict(np.load(self.dataset_path / "data" / "feature_matrices.npz")) return self.features def load_data_splits(self) -> Dict: """Load train/validation/test splits""" with open(self.dataset_path / "data" / "data_splits.json", 'r') as f: self.splits = json.load(f) return self.splits def get_record_by_id(self, record_id: str) -> Optional[Dict]: """Get specific record by ID""" if not self.records: self.load_multimodal_records() for record in self.records: if record.get("record_id") == record_id: return record return None def get_records_by_country(self, country: str) -> List[Dict]: """Get all records from specific country""" if not self.records: self.load_multimodal_records() return [r for r in self.records if r.get("demographics", {}).get("country") == country] def get_records_by_language(self, language: str) -> List[Dict]: """Get all records in specific language""" if not self.records: self.load_multimodal_records() return [r for r in self.records if r.get("demographics", {}).get("primary_language") == language] def get_records_by_fracture_type(self, fracture_type: str) -> List[Dict]: """Get all records of specific fracture type""" if not self.records: self.load_multimodal_records() return [r for r in self.records if r.get("fracture_type") == fracture_type] def get_summary_statistics(self) -> Dict: """Get dataset summary statistics""" if not self.records: self.load_multimodal_records() countries = [r.get("demographics", {}).get("country") for r in self.records] languages = [r.get("demographics", {}).get("primary_language") for r in self.records] regions = [r.get("demographics", {}).get("region_type") for r in self.records] fractures = [r.get("fracture_type") for r in self.records] return { "total_records": len(self.records), "countries": len(set(countries)), "languages": len(set(languages)), "country_distribution": pd.Series(countries).value_counts().to_dict(), "language_distribution": pd.Series(languages).value_counts().to_dict(), "region_distribution": pd.Series(regions).value_counts().to_dict(), "fracture_distribution": pd.Series(fractures).value_counts().to_dict() } def export_subset(self, condition_func, output_path: str): """Export subset of data based on condition function""" if not self.records: self.load_multimodal_records() subset = [r for r in self.records if condition_func(r)] with open(output_path, 'w', encoding='utf-8') as f: json.dump(subset, f, indent=2, ensure_ascii=False) print(f"Exported {len(subset)} records to {output_path}") # Example usage if __name__ == "__main__": # Load dataset dataset = AfricanMedicalDataset() # Load all components records = dataset.load_multimodal_records() features = dataset.load_feature_matrices() splits = dataset.load_data_splits() # Get summary stats = dataset.get_summary_statistics() print("Dataset Statistics:") print(f"Total records: {stats['total_records']}") print(f"Countries: {stats['countries']}") print(f"Languages: {stats['languages']}") # Example queries nigeria_cases = dataset.get_records_by_country("Nigeria") swahili_cases = dataset.get_records_by_language("Swahili") fracture_cases = dataset.get_records_by_fracture_type("Comminuted fracture") print(f"\nNigeria cases: {len(nigeria_cases)}") print(f"Swahili cases: {len(swahili_cases)}") print(f"Comminuted fractures: {len(fracture_cases)}")