"""Validate synthetic pediatric medicine quality & dosing dataset.""" from __future__ import annotations from pathlib import Path import matplotlib.pyplot as plt import pandas as pd SCENARIO_FILES = { "public_paediatric_care": "paed_public_care.csv", "community_otc_children": "paed_community_otc.csv", "neonatal_icu_specialist": "paed_neonatal_icu.csv", } COLORS = {"public_paediatric_care": "#e6550d", "community_otc_children": "#756bb1", "neonatal_icu_specialist": "#31a354"} def load_data() -> pd.DataFrame: frames = [] for scenario, filename in SCENARIO_FILES.items(): df = pd.read_csv(Path("data") / filename) frames.append(df) return pd.concat(frames, ignore_index=True) def plot_validation(df: pd.DataFrame, output_path: Path) -> None: fig, axes = plt.subplots(4, 2, figsize=(14, 16)) axes = axes.flatten() sf_cols = ["is_substandard_falsified", "is_falsified", "deg_contaminated"] sf = df.groupby("scenario")[sf_cols].mean() * 100 sf.plot(kind="bar", ax=axes[0]) axes[0].set_title("SF & DEG Contamination (%)") axes[0].legend(fontsize=7) dose_cols = ["dosing_error", "weight_based_dosing", "measuring_device_used"] dose = df.groupby("scenario")[dose_cols].mean() * 100 dose.plot(kind="bar", ax=axes[1]) axes[1].set_title("Dosing Practices (%)") axes[1].legend(fontsize=7) form = df.groupby(["scenario", "formulation"]).size().groupby(level=0).apply(lambda s: s / s.sum()) form.unstack().plot(kind="bar", stacked=True, ax=axes[2]) axes[2].set_title("Formulation Distribution") axes[2].legend(fontsize=5) out_cols = ["treatment_failure", "adr", "acute_kidney_injury", "death"] out = df.groupby("scenario")[out_cols].mean() * 100 out.plot(kind="bar", ax=axes[3]) axes[3].set_title("Health Outcomes (%)") axes[3].legend(fontsize=7) med = df.groupby(["scenario", "medicine"]).size().groupby(level=0).apply(lambda s: s / s.sum()) med.unstack().plot(kind="bar", stacked=True, ax=axes[4]) axes[4].set_title("Medicine Distribution") axes[4].legend(fontsize=4) for s in SCENARIO_FILES: subset = df[df["scenario"] == s] axes[5].hist(subset["api_pct_label"], bins=50, alpha=0.5, color=COLORS[s], label=s, range=(0, 120)) axes[5].axvline(85, color="red", ls="--", lw=1, label="85% threshold") axes[5].set_title("API Content (% of label)") axes[5].legend(fontsize=6) avail_cols = ["child_formulation_used", "adult_formulation_adapted"] avail = df.groupby("scenario")[avail_cols].mean() * 100 avail.plot(kind="bar", ax=axes[6]) axes[6].set_title("Formulation Availability (%)") axes[6].legend(fontsize=7) err_df = df[df["dosing_error"] == 1] if len(err_df) > 0: et = err_df.groupby(["scenario", "error_type"]).size().groupby(level=0).apply(lambda s: s / s.sum()) et.unstack().plot(kind="bar", stacked=True, ax=axes[7]) axes[7].set_title("Dosing Error Types") axes[7].legend(fontsize=5) plt.tight_layout() fig.savefig(output_path, dpi=200) plt.close(fig) def main() -> None: df = load_data() plot_validation(df, Path("validation_report.png")) print("Saved validation_report.png") if __name__ == "__main__": main()