"""Validate synthetic herbal & traditional medicine safety dataset.""" from __future__ import annotations from pathlib import Path import matplotlib.pyplot as plt import pandas as pd SCENARIO_FILES = { "traditional_healer_practice": "herbal_traditional_healer.csv", "herbal_retail_market": "herbal_retail_market.csv", "hospital_herb_drug_interaction": "herbal_hospital_interaction.csv", } COLORS = {"traditional_healer_practice": "#e6550d", "herbal_retail_market": "#756bb1", "hospital_herb_drug_interaction": "#31a354"} def load_data() -> pd.DataFrame: frames = [] for scenario, filename in SCENARIO_FILES.items(): df = pd.read_csv(Path("data") / filename) frames.append(df) return pd.concat(frames, ignore_index=True) def plot_validation(df: pd.DataFrame, output_path: Path) -> None: fig, axes = plt.subplots(4, 2, figsize=(14, 16)) axes = axes.flatten() cont_cols = ["heavy_metal_contaminated", "microbial_contaminated", "adulterated", "pesticide_residue"] cont = df.groupby("scenario")[cont_cols].mean() * 100 cont.plot(kind="bar", ax=axes[0]) axes[0].set_title("Contamination & Adulteration (%)") axes[0].legend(fontsize=6) health_cols = ["hepatotoxicity", "nephrotoxicity", "gi_adverse", "hospitalisation", "death"] health = df.groupby("scenario")[health_cols].mean() * 100 health.plot(kind="bar", ax=axes[1]) axes[1].set_title("Health Outcomes (%)") axes[1].legend(fontsize=6) prod = df.groupby(["scenario", "product_type"]).size().groupby(level=0).apply(lambda s: s / s.sum()) prod.unstack().plot(kind="bar", stacked=True, ax=axes[2]) axes[2].set_title("Product Type Distribution") axes[2].legend(fontsize=5) ind = df.groupby(["scenario", "indication"]).size().groupby(level=0).apply(lambda s: s / s.sum()) ind.unstack().plot(kind="bar", stacked=True, ax=axes[3]) axes[3].set_title("Indication Distribution") axes[3].legend(fontsize=4) int_cols = ["concurrent_conventional", "disclosed_to_doctor", "interaction_risk"] intc = df.groupby("scenario")[int_cols].mean() * 100 intc.plot(kind="bar", ax=axes[4]) axes[4].set_title("Herb-Drug Interaction Risk (%)") axes[4].legend(fontsize=7) hm_cols = ["lead_detected", "mercury_detected"] hm = df.groupby("scenario")[hm_cols].mean() * 100 hm.plot(kind="bar", ax=axes[5]) axes[5].set_title("Heavy Metal Detection (%)") axes[5].legend(fontsize=7) reg_cols = ["registered_product", "label_present", "quality_tested"] reg = df.groupby("scenario")[reg_cols].mean() * 100 reg.plot(kind="bar", ax=axes[6]) axes[6].set_title("Regulation & Quality (%)") axes[6].legend(fontsize=7) adul_cols = ["synthetic_drug_added"] adul = df.groupby("scenario")[adul_cols].mean() * 100 adul.plot(kind="bar", ax=axes[7]) axes[7].set_title("Synthetic Drug Adulteration (%)") axes[7].legend(fontsize=7) plt.tight_layout() fig.savefig(output_path, dpi=200) plt.close(fig) def main() -> None: df = load_data() plot_validation(df, Path("validation_report.png")) print("Saved validation_report.png") if __name__ == "__main__": main()