Add MM-PBSA scripts + summary (exclude work dirs)

Mirror revision_exec/logs (non-trajectory logs)

Update README.md

Add dimer_rep3_md_400ns.part0004.xtc

Add dimer_rep2_md_400ns.part0004.xtc

Add dimer_rep1_md_400ns.part0005.xtc

Add dimer_rep3_md_350ns.part0003.xtc

Add SHA256 checksums (bundle=dimer-extensions)

Add dimer rep2 300-350 ns extension trajectory

Add monomer_beta_rep3_md_200ns.xtc (200 ns production)

Add monomer_alpha_rep3_md_200ns.xtc (200 ns production)

Add monomer beta rep2 md_200ns.xtc (200 ns)

Refresh dimer rep1 350ns trajectory

Add dimer_rep1_md_350ns.part0004.xtc

Add dimer_rep3_md_200ns.xtc

Add dimer_rep2_md_200ns.xtc

Add dimer_rep1_md_200ns.xtc

Add monomer_beta_rep1_md_200ns.xtc

Add monomer_alpha_rep2_md_200ns.xtc

Add monomer_alpha_rep1_md_200ns.xtc

Add SHA256 checksums (bundle=all)

initial commit