Datasets:
Update README.md
Browse files
README.md
CHANGED
|
@@ -63,6 +63,23 @@ size_categories:
|
|
| 63 |
[DeepLesion](https://nihcc.app.box.com/v/DeepLesion) dataset contains 32,735 diverse lesions in 32,120 CT slices from 10,594 studies of 4,427 unique patients. Each lesion has a bounding box annotation on the key slice, which is derived from the longest diameter and longest
|
| 64 |
perpendicular diameter. We annotated 5000 lesions with [MedSAM2](https://github.com/bowang-lab/MedSAM2) in a human-in-the-loop pipeline.
|
| 65 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 66 |
Please cite both DeepLesion and MedSAM2 when using this dataset.
|
| 67 |
|
| 68 |
```bash
|
|
|
|
| 63 |
[DeepLesion](https://nihcc.app.box.com/v/DeepLesion) dataset contains 32,735 diverse lesions in 32,120 CT slices from 10,594 studies of 4,427 unique patients. Each lesion has a bounding box annotation on the key slice, which is derived from the longest diameter and longest
|
| 64 |
perpendicular diameter. We annotated 5000 lesions with [MedSAM2](https://github.com/bowang-lab/MedSAM2) in a human-in-the-loop pipeline.
|
| 65 |
|
| 66 |
+
```py
|
| 67 |
+
# Install required package
|
| 68 |
+
pip install datasets
|
| 69 |
+
|
| 70 |
+
# Load the dataset
|
| 71 |
+
from datasets import load_dataset
|
| 72 |
+
|
| 73 |
+
# Download and load the dataset
|
| 74 |
+
dataset = load_dataset("wanglab/CT_DeepLesion-MedSAM2")
|
| 75 |
+
|
| 76 |
+
# Access the train split
|
| 77 |
+
train_dataset = dataset["train"]
|
| 78 |
+
|
| 79 |
+
# Display the first example
|
| 80 |
+
print(train_dataset[0])
|
| 81 |
+
```
|
| 82 |
+
|
| 83 |
Please cite both DeepLesion and MedSAM2 when using this dataset.
|
| 84 |
|
| 85 |
```bash
|