---
language:
  - en

library_name: pytorch

tags:
- spatial-multimodal
- spatial-transcriptomics
- spatial-proteomics
- histopathology
- foundation-model


---



<p align="center">
  <img src="./COSIE_Foundation_logo.png" width="500">
</p>


[![python >3.9.19](https://img.shields.io/badge/python-3.9.19-blue)](https://www.python.org/) 



**COSIE-Foundation** is a unified framework for large-scale spatial multimodal integration, virtual pathology annotation, and virtual gene&protein prediction, all at cellular resolution. 


<p align="center">
  <img src="./COSIE_Foundation_framework.png" width="100%">
</p>

# Usage

Please check the instruction of COSIE-Foundation at [Github Repo](https://github.com/weilicode/cosie-foundation)


# Questions
If you have any questions about COSIE-Foundation, feel free to open an [issue](https://github.com/weilicode/cosie-foundation/issues) or contact us via email(Wei.Li@PennMedicine.upenn.edu).