# OS files
.DS_Store
Thumbs.db

# Editor files
*.swp
*.swo
*~
.vscode/
.idea/

# Audit outputs (generated, not committed)
audit_output/
audits/fieldbioinformatics_v1_1_2/
audits/dogfood-v1.5.7-precommit-3repo/
audits/final-verification-v1.5.7-3repo/
audits/final-verification-v1.5.8-3repo/
audits/ab_*/
audits/clawbio_*/
audits/dogfood-*/
audits/bio-detector-benchmark-5repo*/
audits/external_*
audits/tmp_*
artic-network_fieldbioinformatics_detailed_5p/
stem_output*/
*.audit.md
*.claim_matrix.md
*.evidence_ledger.md

# Temporary files
tmp/
*.tmp
*.bak
.manual_verify/
.tmp_build_temp/
.tmp_pycompile/
.tmp_pytest/
.tmp_pytest_run/

# Node modules (if skills.sh used)
node_modules/

# Python cache
__pycache__/
.pytest_cache/
*.pyc
build/
dist/
*.egg-info/

# Environment files (never commit credentials)
.env
.env.*
!.env.example
.env.local
*.key
*.pem

# Internal documents (not for public repo)
STRATEGY_INTERNAL.md
docs/STRATEGY_INTERNAL.md
docs/*_INTERNAL.md
docs/DETERMINISTIC_DIAGNOSTICS_PROPOSAL.md
docs/private/
docs/1.txt
docs/INSPECTION_REPORT_*_v*.md
spec/
_cli_test/