Tahoe-x1 / 3b-model /model_config.yml
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add explicit chemical encoder params
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name: mosaicfm
d_model: 2560
n_layers: 32
init_device: cpu
expansion_ratio: 4
standard_scale_outputs: false
transformer_activation: gelu
n_heads: 20
norm_scheme: pre
use_generative_training: false
use_cell_conditioned_generation: false
use_glu: false
cell_emb_style: cls
attn_config:
attn_impl: flash
use_attn_mask: false
attn_type: grouped_query_attention
kv_nheads: 20
attn_pdrop: 0.0
norm_config:
norm_type: layernorm
eps: 1.0e-05
expression_encoder:
input_emb_style: continuous
dropout: 0.1
max_value: 512
activation: gelu
use_norm: true
gene_encoder:
use_norm: true
mvc:
arch_style: inner product
query_activation: sigmoid
scaled_dot_product: true
expression_decoder:
n_outputs: 1
n_layers: 1
activation: gelu
chemical_encoder:
num_drugs: 378
fp_dim: 2048
activation: gelu
padding_idx: 0
freeze: false
vocab_size: 62721
precision: amp_bf16
wandb_id: vevotx/vevo-MFM-v2/cdk744ih