Split (1)

train · 116k rows

reference_name stringclasses 24 values	start_position int64 322 249M	end_position int64 322 249M	reference_bases stringclasses 4 values	alternate_bases stringclasses 4 values	variant_id stringlengths 8 19	allele_frequency float64 0 0.5	african_allele_frequency float64 0 0.74	european_allele_frequency float64 0 0.75	gene_symbol stringlengths 0 8	consequence stringclasses 14 values	impact stringclasses 5 values	impact_category stringclasses 4 values	is_rare bool 2 classes
chrX	107,552,337	107,552,337	T	C	chrX_107552337_T_C	0.016355	0.017688	0.024332				Unknown	false
chr2	200,511,139	200,511,139	C	T	rs588091478	0.021662	0.012234	0.022693	GENE1527	stop_gained	LOW	Low/Modifier Impact	false
chr10	126,170,179	126,170,179	T	G	chr10_126170179_T_G	0.001211	0.000878	0.001611				Unknown	true
chr6	159,083,320	159,083,320	A	G	rs850439340	0.018207	0.017204	0.017356	GENE248	missense_variant	LOW	Low/Modifier Impact	false
chr9	21,901,188	21,901,188	G	C	rs526393471	0.027339	0.01836	0.03863	GENE885	frameshift_variant	LOW	Low/Modifier Impact	false
chr14	61,539,428	61,539,428	T	C	rs92849034	0.041587	0.061687	0.039917				Unknown	false
chr1	127,128,299	127,128,299	T	C	rs220900538	0.004223	0.003352	0.002422				Unknown	true
chr7	35,114,963	35,114,963	C	G	rs103317065	0.045685	0.06243	0.034353				Unknown	false
chr2	29,260,843	29,260,843	C	T	rs730780949	0.028116	0.014617	0.032969	GENE1164	missense_variant	MODERATE	Moderate Impact	false
chr8	61,606,632	61,606,632	T	C	chr8_61606632_T_C	0.003909	0.003565	0.003059	GENE963	upstream_gene_variant	MODIFIER	Low/Modifier Impact	true
chr18	53,480,670	53,480,670	G	A	rs293851750	0.025687	0.014858	0.03849	GENE1072	stop_gained	MODIFIER	Low/Modifier Impact	false
chr6	19,414,931	19,414,931	T	A	rs368559359	0.020973	0.011463	0.023097				Unknown	false
chrX	56,553,264	56,553,264	T	C	rs942270698	0.153223	0.196018	0.204217	GENE784	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr9	20,800,279	20,800,279	T	G	rs518517513	0.046584	0.045316	0.049572	GENE89	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr19	4,316,987	4,316,987	C	G	rs619946460	0.023633	0.018575	0.023268	GENE143	missense_variant	MODIFIER	Low/Modifier Impact	false
chr12	7,665,885	7,665,885	C	T	chr12_7665885_C_T	0.02581	0.024742	0.035926	GENE72	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr11	80,121,515	80,121,515	T	C	rs408063364	0.004701	0.003453	0.002563	GENE942	downstream_gene_variant	MODIFIER	Low/Modifier Impact	true
chr5	144,924,450	144,924,450	C	T	rs317120426	0.041338	0.035971	0.024878	GENE1226	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr9	95,521,490	95,521,490	A	T	rs375885118	0.430369	0.499944	0.589302				Unknown	false
chr12	67,129,874	67,129,874	T	A	rs529028170	0.174135	0.104546	0.194894	GENE961	stop_lost	MODIFIER	Low/Modifier Impact	false
chr3	21,588,585	21,588,585	A	C	chr3_21588585_A_C	0.012976	0.007869	0.012415				Unknown	false
chr20	32,716,671	32,716,671	T	C	rs50961377	0.015532	0.015882	0.02097	FMR1	splice_donor_variant	LOW	Low/Modifier Impact	false
chr2	236,307,650	236,307,650	A	C	rs766614298	0.040385	0.023663	0.047311	PARK2	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chrY	17,328,574	17,328,574	G	A	rs190420603	0.016543	0.015686	0.02268				Unknown	false
chr6	97,798,097	97,798,097	T	C	rs800972821	0.040151	0.027795	0.05152				Unknown	false
chr8	18,834,276	18,834,276	C	G	chr8_18834276_C_G	0.220981	0.165271	0.263255				Unknown	false
chr2	38,568,637	38,568,637	T	A	chr2_38568637_T_A	0.017075	0.023903	0.017974	GENE1834	missense_variant	HIGH	High Impact	false
chr15	4,035,178	4,035,178	C	T	rs220504208	0.003071	0.001618	0.002462				Unknown	true
chr1	77,762,558	77,762,558	T	C	chr1_77762558_T_C	0.143613	0.208317	0.129097	GENE1504	upstream_gene_variant	HIGH	High Impact	false
chr5	50,541,519	50,541,519	T	G	chr5_50541519_T_G	0.040066	0.022963	0.042728	GENE726	missense_variant	MODIFIER	Low/Modifier Impact	false
chr14	45,449,644	45,449,644	T	C	rs734020977	0.019133	0.012642	0.011319				Unknown	false
chr4	108,488,360	108,488,360	G	C	rs636513210	0.297744	0.427793	0.162343	GENE954	intron_variant	MODERATE	Moderate Impact	false
chr14	49,700,617	49,700,617	A	C	chr14_49700617_A_C	0.007446	0.005404	0.008996	GENE1781	splice_donor_variant	MODERATE	Moderate Impact	true
chr4	110,992,858	110,992,858	C	T	rs748600020	0.022329	0.020195	0.029139	GENE446	frameshift_variant	MODERATE	Moderate Impact	false
chrX	135,854,896	135,854,896	T	C	rs588594666	0.155494	0.2058	0.209996	GENE1650	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chr18	34,474,714	34,474,714	C	G	rs450422640	0.015477	0.011833	0.011914				Unknown	false
chr3	35,234,788	35,234,788	T	C	rs49950196	0.028355	0.02848	0.040951	GENE212	synonymous_variant	LOW	Low/Modifier Impact	false
chr4	175,155,018	175,155,018	A	G	rs833458509	0.021455	0.026458	0.023049	GENE1641	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr10	127,556,905	127,556,905	T	G	rs336200854	0.040625	0.043742	0.055737	GENE1592	start_lost	LOW	Low/Modifier Impact	false
chr2	74,048,225	74,048,225	G	C	chr2_74048225_G_C	0.005717	0.006723	0.002925	GENE1421	downstream_gene_variant	LOW	Low/Modifier Impact	true
chr2	55,733,762	55,733,762	C	T	chr2_55733762_C_T	0.035884	0.020384	0.030902	GENE1814	synonymous_variant	HIGH	High Impact	false
chr17	69,455,795	69,455,795	T	G	rs457722826	0.259096	0.220878	0.324969				Unknown	false
chr1	5,068,066	5,068,066	G	C	rs943608301	0.034162	0.036433	0.037684	GENE1051	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr5	45,006,694	45,006,694	G	A	rs485140398	0.029518	0.033982	0.015224	GENE1732	stop_lost	MODERATE	Moderate Impact	false
chr5	38,742,255	38,742,255	A	T	rs712951027	0.031455	0.04224	0.031717	GENE1136	missense_variant	MODIFIER	Low/Modifier Impact	false
chrY	6,011,286	6,011,286	T	G	rs582889892	0.021866	0.014337	0.017007	GENE345	intron_variant	LOW	Low/Modifier Impact	false
chr3	67,660,842	67,660,842	G	A	rs571874112	0.154288	0.156156	0.136361	GENE1283	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chrX	121,505,406	121,505,406	G	A	chrX_121505406_G_A	0.010897	0.011	0.01406	GENE220	synonymous_variant	MODIFIER	Low/Modifier Impact	false
chr7	18,816,059	18,816,059	G	A	chr7_18816059_G_A	0.032653	0.02141	0.028893	GENE851	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr3	196,565,672	196,565,672	C	T	chr3_196565672_C_T	0.047253	0.039071	0.057646	GENE1954	stop_gained	MODIFIER	Low/Modifier Impact	false
chr11	32,503,972	32,503,972	G	T	chr11_32503972_G_T	0.022093	0.022625	0.02123	GENE1878	intron_variant	MODIFIER	Low/Modifier Impact	false
chr3	189,245,696	189,245,696	G	T	rs767180148	0.029619	0.01921	0.020714	GENE1450	start_lost	MODIFIER	Low/Modifier Impact	false
chr4	167,548,183	167,548,183	C	A	chr4_167548183_C_A	0.009221	0.00516	0.012693	GENE153	stop_gained	MODIFIER	Low/Modifier Impact	true
chr6	41,553,284	41,553,284	A	C	rs846729493	0.157683	0.13202	0.229902	GENE1516	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr8	99,395,820	99,395,820	T	A	chr8_99395820_T_A	0.03335	0.024232	0.034884	GENE1552	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chr7	70,407,424	70,407,424	A	G	rs256977783	0.015718	0.011762	0.018227				Unknown	false
chr15	82,572,414	82,572,414	C	T	chr15_82572414_C_T	0.005864	0.007291	0.00855	GENE1601	upstream_gene_variant	MODIFIER	Low/Modifier Impact	true
chr7	4,418,045	4,418,045	G	T	rs795995097	0.044161	0.066196	0.050399				Unknown	false
chr11	36,883,829	36,883,829	G	A	chr11_36883829_G_A	0.000948	0.000995	0.000703				Unknown	true
chr2	42,393,140	42,393,140	C	A	rs642792443	0.041169	0.060223	0.056645				Unknown	false
chr2	213,197,695	213,197,695	C	T	chr2_213197695_C_T	0.045127	0.044977	0.049967	GENE1580	stop_gained	HIGH	High Impact	false
chr10	105,263,156	105,263,156	C	T	rs277003845	0.001486	0.000812	0.000805				Unknown	true
chr7	150,134,224	150,134,224	C	T	rs137356805	0.017693	0.026341	0.025134	GENE1389	missense_variant	MODIFIER	Low/Modifier Impact	false
chr12	51,091,562	51,091,562	C	A	rs92283959	0.002792	0.002307	0.004058				Unknown	true
chr2	38,830,720	38,830,720	T	A	rs926233607	0.024038	0.013489	0.019606	GENE455	stop_lost	MODIFIER	Low/Modifier Impact	false
chr16	42,347,050	42,347,050	T	C	rs515689829	0.034997	0.049175	0.028776				Unknown	false
chr20	40,220,084	40,220,084	A	T	rs826374212	0.002292	0.002724	0.001321	GENE1509	intron_variant	MODIFIER	Low/Modifier Impact	true
chr15	89,785,278	89,785,278	C	G	rs389093439	0.415343	0.599744	0.266986	GENE709	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr8	82,965,749	82,965,749	A	T	rs175337239	0.043667	0.026215	0.036942	GENE1575	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr16	4,258,253	4,258,253	G	C	rs604805362	0.039874	0.029395	0.044396	GENE617	synonymous_variant	LOW	Low/Modifier Impact	false
chr11	44,395,287	44,395,287	T	G	chr11_44395287_T_G	0.021666	0.015536	0.028241				Unknown	false
chr6	162,329,865	162,329,865	C	T	rs762096811	0.026535	0.034496	0.032094				Unknown	false
chr10	34,718,265	34,718,265	G	A	rs608765518	0.017123	0.017698	0.018863				Unknown	false
chr13	53,489,105	53,489,105	G	T	chr13_53489105_G_T	0.043917	0.037175	0.049498	GENE1488	upstream_gene_variant	LOW	Low/Modifier Impact	false
chr10	104,147,850	104,147,850	T	G	rs215282839	0.034926	0.04569	0.03705				Unknown	false
chr19	3,621,117	3,621,117	A	G	chr19_3621117_A_G	0.047349	0.066366	0.046084	GENE192	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr1	152,325,075	152,325,075	G	T	rs794027568	0.042522	0.061095	0.058713	GENE1318	frameshift_variant	LOW	Low/Modifier Impact	false
chr1	13,786,083	13,786,083	T	C	rs889622284	0.007537	0.01071	0.006958	GENE41	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	true
chr18	14,156,443	14,156,443	T	A	chr18_14156443_T_A	0.072506	0.100575	0.037162	GENE1105	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chrY	5,429,032	5,429,032	T	G	rs542480325	0.008625	0.009851	0.011086				Unknown	true
chr3	125,842,031	125,842,031	T	A	chr3_125842031_T_A	0.004327	0.00506	0.006132				Unknown	true
chr8	15,326,277	15,326,277	A	C	rs51810228	0.043523	0.025373	0.022411				Unknown	false
chr19	39,478,113	39,478,113	T	G	rs458656409	0.00517	0.006764	0.004531				Unknown	true
chr6	153,460,934	153,460,934	A	C	rs882407214	0.03306	0.033349	0.034895	GENE818	upstream_gene_variant	HIGH	High Impact	false
chrX	94,410,463	94,410,463	C	A	rs67551176	0.038629	0.029339	0.035494				Unknown	false
chr2	6,767,576	6,767,576	T	C	rs224783623	0.006864	0.006513	0.009601	GENE683	stop_gained	LOW	Low/Modifier Impact	true
chr1	185,779,872	185,779,872	T	A	rs197431449	0.005061	0.002727	0.0031				Unknown	true
chr10	19,822,034	19,822,034	A	C	chr10_19822034_A_C	0.004055	0.00384	0.002863	GENE73	stop_gained	MODIFIER	Low/Modifier Impact	true
chr21	27,757,964	27,757,964	G	T	chr21_27757964_G_T	0.033258	0.019563	0.025826	GENE695	stop_gained	MODIFIER	Low/Modifier Impact	false
chr22	41,048,584	41,048,584	C	T	chr22_41048584_C_T	0.023215	0.019416	0.023357	GENE22	synonymous_variant	MODIFIER	Low/Modifier Impact	false
chr2	34,633,062	34,633,062	T	G	rs615041022	0.016538	0.012125	0.011345	GENE1299	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr7	46,723,095	46,723,095	G	C	rs666145986	0.018543	0.027236	0.023594	GENE1215	3_prime_UTR_variant	HIGH	High Impact	false
chr3	73,869,050	73,869,050	T	C	chr3_73869050_T_C	0.005731	0.003382	0.007333				Unknown	true
chr7	134,782,679	134,782,679	A	C	chr7_134782679_A_C	0.033421	0.048212	0.036808				Unknown	false
chr4	102,556,539	102,556,539	G	A	rs725114220	0.005443	0.003527	0.002917	GENE1180	splice_donor_variant	LOW	Low/Modifier Impact	true
chr11	46,336,672	46,336,672	C	G	rs794242549	0.019454	0.014912	0.013627				Unknown	false
chr13	98,648,070	98,648,070	G	A	chr13_98648070_G_A	0.040111	0.03863	0.038944				Unknown	false
chrY	10,798,210	10,798,210	T	C	rs536379479	0.006331	0.003509	0.00907				Unknown	true
chr12	40,681,391	40,681,391	A	C	chr12_40681391_A_C	0.046787	0.063268	0.063361	GENE220	start_lost	MODIFIER	Low/Modifier Impact	false
chr16	52,455,831	52,455,831	A	C	rs677646125	0.046292	0.052603	0.066353	GENE1693	synonymous_variant	MODIFIER	Low/Modifier Impact	false

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