Datasets:
Update README.md
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README.md
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@@ -32,9 +32,13 @@ database versions for all those that have been updated this time around.
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# New databases
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JaponicusDB date imported 2026-06-23
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CIRCpedia v3
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circAtlas 3.0
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Sci-ModoM (via MODOMICS) v4.0.2
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mirtronDB 2.0
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@@ -42,31 +46,58 @@ mirtronDB 2.0
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These databases were updated in this release to the version stated below:
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ENA 2025-03-06 -> 2026-05-15
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Ensembl 113 -> 115
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Ensembl Fungi 60 -> 62
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Ensembl Metazoa 60 -> 62
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Ensembl Plants 60 -> 62
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Ensembl Protists 60 -> 62
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Ensembl/GENCODE human 47/mouse M34 -> human 49/mouse M38
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Expression Atlas 2025-04-01 -> 2026-06-23
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FlyBase FB2025_01 -> FB2026_01
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GeneCards 5.23 -> 5.26
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HGNC 2025-03-06 -> 2026-04-28
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IntAct 2024-11-05 -> 2026-04-13
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MalaCards 5.23 -> 5.26
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PDBe 2024-11-05 -> 2026-04-29
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PomBase 2024-11-05 -> 2026-04-28
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QuickGo 2024-11-05 -> 2026-04-13
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RefSeq 2025-03-06 -> 2026-03-25 (v235)
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SGD 2025-03-06 -> 2026-03-26
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WormBase 2025-03-06 -> 2026-05-15
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ZFIN 2024-11-05 -> 2026-03-27
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TAIR 10 -> 12
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gtRNAdb 21 -> 22
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RGD March 2018 -> 2026-04-28
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SILVA 138.1 -> 138.2
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MGNIFY 2025-03-06 -> 2026-04-13
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MODOMICS 2024 -> 2025
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EVLNCRNAS 2.0 -> 3.0
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REDIportal 2.0 -> 3.0
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# New databases
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JaponicusDB date imported 2026-06-23
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+
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CIRCpedia v3
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+
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circAtlas 3.0
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+
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Sci-ModoM (via MODOMICS) v4.0.2
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+
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mirtronDB 2.0
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These databases were updated in this release to the version stated below:
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| 47 |
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ENA 2025-03-06 -> 2026-05-15
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+
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Ensembl 113 -> 115
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+
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Ensembl Fungi 60 -> 62
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+
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Ensembl Metazoa 60 -> 62
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+
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Ensembl Plants 60 -> 62
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+
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Ensembl Protists 60 -> 62
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+
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Ensembl/GENCODE human 47/mouse M34 -> human 49/mouse M38
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| 61 |
+
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Expression Atlas 2025-04-01 -> 2026-06-23
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| 63 |
+
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FlyBase FB2025_01 -> FB2026_01
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+
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GeneCards 5.23 -> 5.26
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+
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HGNC 2025-03-06 -> 2026-04-28
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+
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IntAct 2024-11-05 -> 2026-04-13
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+
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MalaCards 5.23 -> 5.26
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+
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PDBe 2024-11-05 -> 2026-04-29
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+
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PomBase 2024-11-05 -> 2026-04-28
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+
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QuickGo 2024-11-05 -> 2026-04-13
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+
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RefSeq 2025-03-06 -> 2026-03-25 (v235)
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+
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SGD 2025-03-06 -> 2026-03-26
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+
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WormBase 2025-03-06 -> 2026-05-15
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ZFIN 2024-11-05 -> 2026-03-27
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TAIR 10 -> 12
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gtRNAdb 21 -> 22
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+
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RGD March 2018 -> 2026-04-28
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+
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SILVA 138.1 -> 138.2
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MGNIFY 2025-03-06 -> 2026-04-13
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MODOMICS 2024 -> 2025
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EVLNCRNAS 2.0 -> 3.0
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REDIportal 2.0 -> 3.0
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