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id
int64
age
int64
sex
string
child
int64
urban
int64
occupation
string
arbovirus
string
serotype
string
previous_infection
int64
secondary_dengue
int64
rainy_season
int64
standing_water_near_home
int64
bed_net_use
int64
repellent_use
int64
yellow_fever_vaccinated
int64
pregnancy
int64
fever
int64
headache
int64
myalgia
int64
arthralgia
int64
rash
int64
retro_orbital_pain
int64
conjunctivitis
int64
nausea_vomiting
int64
abdominal_pain
int64
haemorrhagic_manifestation
int64
jaundice
int64
severity
string
platelet_count
int64
thrombocytopenia
int64
haematocrit
float64
clinical_diagnosis_only
int64
rdt_performed
int64
ns1_positive
int64
igg_igm_tested
int64
pcr_confirmed
int64
misdiagnosed_as_malaria
int64
hospitalised
int64
iv_fluids
int64
platelet_transfusion
int64
icu_admission
int64
antipyretic_given
int64
died
int64
chronic_arthralgia
int64
congenital_zika
int64
recovery_days
int64
1
32
M
0
0
manual
dengue
DENV-4
0
0
0
1
0
0
0
0
1
1
0
1
1
0
0
1
0
0
0
moderate
52,762
1
46.1
1
0
0
0
0
0
1
1
0
0
1
0
0
0
7
2
60
F
0
1
trader
chikungunya
null
0
0
1
1
1
0
0
0
1
0
0
1
0
0
0
0
0
0
0
mild
184,857
0
41.1
0
1
0
0
0
0
0
0
0
0
1
0
0
0
30
3
23
M
0
1
farmer
dengue
DENV-3
0
0
1
0
0
0
0
0
1
1
1
1
1
1
0
0
1
0
0
mild
155,697
0
43.5
0
1
0
0
0
0
0
0
0
0
1
0
0
0
3
4
18
M
0
1
manual
chikungunya
null
0
0
1
1
0
0
0
0
1
1
1
1
1
0
0
1
0
0
0
moderate
43,780
1
38.1
1
0
0
0
0
0
0
0
0
0
1
0
1
0
18
5
40
M
0
1
student
dengue
DENV-4
0
0
0
1
0
0
0
0
1
1
1
1
0
1
0
1
1
0
0
moderate
42,936
1
38.1
0
1
1
0
0
0
1
0
0
0
1
0
0
0
4
6
57
M
0
0
student
chikungunya
null
0
0
1
1
0
1
0
0
1
0
1
1
1
0
0
0
1
0
0
mild
220,717
0
40.7
0
1
0
0
0
0
0
0
0
0
0
0
1
0
6
7
59
F
0
0
trader
yellow_fever
null
0
0
1
1
0
0
1
0
1
0
0
0
0
0
0
0
0
0
0
moderate
63,562
1
45.5
0
1
0
0
0
0
0
0
0
0
1
0
0
0
10
8
52
F
0
1
farmer
chikungunya
null
0
0
1
1
0
0
0
0
1
1
1
1
1
0
0
0
1
0
0
mild
116,270
0
33.9
0
1
0
0
0
0
0
0
0
0
1
0
0
0
5
9
20
M
0
1
manual
yellow_fever
null
0
0
0
1
0
0
1
0
1
1
0
0
0
0
0
0
0
0
0
mild
198,234
0
36.4
1
0
0
0
0
1
0
0
0
0
1
0
0
0
8
10
61
M
0
1
student
zika
null
0
0
1
1
1
0
0
0
1
1
1
0
0
0
1
0
0
0
0
mild
181,093
0
42.2
0
1
0
0
0
0
0
0
0
0
1
0
0
0
3
11
24
M
0
1
student
zika
null
0
0
1
1
0
0
0
0
1
1
1
0
1
0
0
1
1
0
0
moderate
90,446
1
34.4
1
0
0
0
0
1
0
0
0
0
1
0
0
0
10
12
11
F
1
0
healthcare
rift_valley_fever
null
1
0
1
1
0
0
0
0
1
1
1
0
1
0
0
0
0
0
0
mild
184,553
0
38.4
0
1
0
0
0
0
0
0
0
0
1
0
0
0
11
13
36
M
0
1
student
rift_valley_fever
null
0
0
0
1
0
0
0
0
1
1
1
0
0
0
0
1
0
1
0
severe
152,825
0
43.7
1
0
0
0
0
1
0
0
0
0
1
0
0
0
16
14
17
F
0
1
student
dengue
DENV-2
0
0
1
0
0
0
0
0
1
1
1
0
1
1
0
1
0
0
0
moderate
112,550
0
45.3
1
0
0
0
0
0
1
1
0
0
1
0
0
0
4
15
42
M
0
1
manual
chikungunya
null
0
0
0
1
0
0
0
0
1
0
1
1
0
0
0
1
0
0
0
mild
154,315
0
46.5
1
0
0
0
0
1
0
0
0
0
1
0
1
0
5
16
32
M
0
0
other
dengue
DENV-3
1
0
0
0
1
0
0
0
1
1
1
0
1
0
0
0
1
1
0
severe
113,180
0
30
1
0
0
0
0
1
0
0
0
0
1
0
0
0
30
17
30
F
0
0
farmer
dengue
DENV-1
0
0
0
0
0
0
0
0
1
1
0
0
0
1
0
0
1
0
0
moderate
117,131
0
37
0
1
0
0
0
0
1
1
0
0
1
0
0
0
4
18
47
M
0
1
manual
chikungunya
null
0
0
1
1
0
0
0
0
1
1
1
1
0
0
0
0
0
0
0
mild
116,665
0
32.1
0
1
0
0
0
0
0
0
0
0
1
0
0
0
4
19
44
F
0
1
manual
chikungunya
null
0
0
1
0
0
0
0
0
1
1
0
1
0
0
0
0
0
0
0
moderate
97,212
1
35.7
0
1
0
0
0
0
1
1
0
0
1
0
1
0
9
20
23
M
0
0
farmer
rift_valley_fever
null
0
0
1
1
0
0
0
0
1
0
0
0
0
0
0
1
0
0
0
mild
153,979
0
39.6
0
1
0
0
0
0
0
0
0
0
1
0
0
0
5
21
41
F
0
1
manual
yellow_fever
null
1
0
1
1
1
0
0
0
1
1
0
0
1
0
0
1
1
0
0
moderate
48,537
1
31.6
1
0
0
0
0
0
0
0
0
0
1
0
0
0
3
22
12
F
1
1
manual
chikungunya
null
0
0
0
1
0
0
0
0
1
1
1
1
1
0
0
1
0
0
0
mild
119,378
0
44.5
0
1
0
0
0
0
0
0
0
0
1
0
0
0
5
23
6
M
1
1
manual
chikungunya
null
0
0
1
1
0
0
0
0
1
0
0
1
1
0
0
0
0
0
0
mild
159,417
0
48.1
1
0
0
0
0
1
0
0
0
0
1
0
1
0
7
24
8
F
1
1
other
chikungunya
null
0
0
1
0
1
0
0
0
1
0
0
1
1
0
0
1
1
0
0
moderate
23,050
1
42.2
1
0
0
0
0
0
0
0
0
0
1
0
0
0
10
25
28
M
0
0
farmer
chikungunya
null
0
0
0
1
0
0
0
0
1
1
1
1
1
0
0
0
1
0
0
mild
170,980
0
32.5
1
0
0
0
0
0
0
0
0
0
1
0
1
0
14
26
2
M
1
0
student
dengue
DENV-2
1
1
1
1
0
0
0
0
1
0
0
0
1
0
0
1
0
0
0
mild
47,410
1
43.9
0
1
1
0
0
0
0
0
0
0
1
0
0
0
4
27
63
F
0
0
manual
chikungunya
null
0
0
0
0
0
0
0
0
1
1
1
1
0
0
0
0
0
0
0
mild
188,082
0
28.7
0
1
0
0
0
0
0
0
0
0
1
0
1
0
5
28
24
M
0
1
farmer
dengue
DENV-1
0
0
1
1
0
0
0
0
1
1
0
1
0
1
0
1
0
0
0
moderate
76,152
1
45.6
0
1
1
0
0
0
0
0
0
0
1
0
0
0
5
29
10
M
1
0
farmer
dengue
DENV-1
0
0
1
1
1
0
0
0
1
1
1
0
0
1
0
0
0
0
0
moderate
44,274
1
40.1
1
0
0
0
0
0
0
0
0
0
0
0
0
0
17
30
40
F
0
1
farmer
chikungunya
null
0
0
1
1
1
1
0
0
1
1
0
1
0
0
0
0
1
0
0
mild
106,261
0
42
0
1
0
0
0
0
0
0
0
0
0
0
1
0
16
31
28
F
0
0
student
chikungunya
null
0
0
1
0
1
0
0
0
1
1
1
1
1
0
0
0
0
0
0
mild
165,171
0
46.4
0
1
0
0
0
0
0
0
0
0
1
0
0
0
14
32
24
F
0
1
student
dengue
DENV-4
0
0
0
1
0
0
0
0
1
0
1
1
0
0
0
1
0
0
0
moderate
95,837
1
47.8
0
1
0
0
0
0
0
0
0
0
1
0
0
0
7
33
55
M
0
0
trader
zika
null
0
0
1
1
0
0
0
0
1
1
0
0
0
0
1
1
0
0
0
mild
163,463
0
42.1
0
1
0
0
0
0
0
0
0
0
0
0
0
0
4
34
27
F
0
1
farmer
dengue
DENV-2
0
0
1
1
0
0
0
0
1
1
1
1
0
0
0
0
0
0
0
moderate
36,267
1
41.4
0
1
1
0
0
0
1
0
0
0
1
0
0
0
5
35
28
M
0
0
student
zika
null
0
0
1
1
0
0
0
0
1
0
1
0
0
0
1
1
0
0
0
mild
165,881
0
42.8
0
1
0
0
0
0
0
0
0
0
1
0
0
0
21
36
13
F
1
1
farmer
dengue
DENV-4
0
0
0
1
0
0
0
0
1
1
1
1
0
1
0
0
1
0
0
mild
146,484
0
44.7
0
1
0
0
0
0
0
0
0
0
1
0
0
0
9
37
32
F
0
1
other
rift_valley_fever
null
0
0
1
1
0
0
0
1
1
1
1
0
0
0
0
0
1
0
0
mild
145,610
0
39.8
1
0
0
0
0
1
0
0
0
0
1
0
0
0
3
38
23
F
0
1
other
dengue
DENV-3
0
0
0
0
0
0
0
0
1
1
0
1
0
0
0
0
0
0
0
mild
184,822
0
47.4
0
1
0
0
0
0
0
0
0
0
1
0
0
0
4
39
29
F
0
1
healthcare
dengue
DENV-2
0
0
1
1
0
0
0
0
1
1
1
0
0
1
0
0
1
0
0
mild
174,788
0
41.7
1
0
0
0
0
1
0
0
0
0
1
0
0
0
7
40
1
M
1
1
trader
yellow_fever
null
0
0
0
1
0
0
0
0
1
0
0
0
1
0
0
0
0
0
0
mild
128,493
0
42.7
1
0
0
0
0
0
0
0
0
0
1
0
0
0
8
41
64
M
0
1
healthcare
dengue
DENV-1
0
0
1
1
0
0
0
0
1
1
1
0
0
1
0
0
1
0
0
moderate
43,484
1
41.1
0
1
1
0
0
0
0
0
0
0
0
0
0
0
7
42
34
M
0
0
manual
dengue
DENV-3
0
0
1
0
0
0
0
0
1
0
0
0
1
0
0
0
0
0
0
mild
173,933
0
42.6
0
1
0
0
0
0
0
0
0
0
1
0
0
0
10
43
40
F
0
0
student
rift_valley_fever
null
1
0
0
1
1
0
0
1
1
1
1
0
0
0
0
1
0
0
0
mild
140,244
0
29.5
1
0
0
0
0
0
0
0
0
0
1
0
0
0
13
44
47
M
0
0
student
rift_valley_fever
null
0
0
1
1
1
0
0
0
1
1
1
0
1
0
0
0
0
0
0
mild
127,540
0
43.5
0
1
0
0
0
0
0
0
0
0
0
0
0
0
12
45
6
M
1
0
trader
zika
null
0
0
1
0
0
1
0
0
1
1
1
0
1
0
1
0
0
0
0
mild
155,945
0
41.8
0
1
0
0
0
0
0
0
0
0
1
0
0
0
26
46
37
M
0
1
other
chikungunya
null
0
0
0
1
0
0
0
0
1
1
1
1
0
0
0
1
1
0
0
moderate
60,552
1
42.1
0
1
0
0
0
0
0
0
0
0
1
0
1
0
6
47
32
F
0
1
other
yellow_fever
null
1
0
1
1
0
0
0
0
1
1
0
0
1
0
0
1
0
0
0
moderate
58,017
1
34.4
0
1
0
0
0
0
1
0
0
0
1
0
0
0
12
48
28
M
0
1
farmer
rift_valley_fever
null
0
0
1
1
0
0
0
0
1
0
1
0
1
0
0
0
0
0
0
mild
120,984
0
36.9
0
1
0
0
0
0
0
0
0
0
1
0
0
0
5
49
42
M
0
1
student
rift_valley_fever
null
0
0
0
0
0
0
0
0
1
0
1
0
0
0
0
0
1
1
0
severe
144,802
0
41.8
0
1
0
0
0
0
0
0
0
0
0
0
0
0
21
50
28
F
0
1
other
dengue
DENV-2
0
0
1
0
0
0
0
0
0
0
1
0
0
1
0
1
0
0
0
mild
50,771
1
35
0
1
1
0
0
0
0
0
0
0
1
0
0
0
9
51
17
M
0
1
other
dengue
DENV-2
0
0
0
1
0
0
0
0
1
1
1
0
1
1
0
1
0
0
0
moderate
90,803
1
42.1
1
0
0
0
0
1
0
0
0
0
0
0
0
0
7
52
34
M
0
1
other
yellow_fever
null
1
0
0
1
0
1
0
0
1
1
1
0
0
0
0
1
0
0
0
mild
134,887
0
44.6
1
0
0
0
0
1
0
0
0
0
1
0
0
0
8
53
47
F
0
0
manual
yellow_fever
null
0
0
0
1
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
mild
106,537
0
41.7
0
1
0
0
0
0
0
0
0
0
0
0
0
0
3
54
34
M
0
0
farmer
chikungunya
null
0
0
0
1
1
0
0
0
1
1
1
0
0
0
0
0
1
0
0
moderate
169,189
0
32.2
1
0
0
0
0
1
1
1
0
0
1
0
1
0
25
55
24
M
0
1
manual
zika
null
0
0
1
0
1
0
0
0
1
1
1
0
0
0
0
1
0
0
0
mild
194,833
0
36.7
0
1
0
0
0
0
0
0
0
0
1
0
0
0
22
56
32
F
0
1
other
chikungunya
null
1
0
0
0
0
0
0
0
1
1
1
1
0
0
0
0
0
0
0
mild
189,542
0
40.2
1
0
0
0
0
0
0
0
0
0
1
0
1
0
4
57
27
F
0
0
trader
dengue
DENV-4
0
0
1
1
0
0
0
0
1
1
1
1
1
1
0
1
1
0
0
severe
65,855
1
34.5
1
0
0
0
0
0
0
0
0
0
1
0
0
0
10
58
47
M
0
1
trader
dengue
DENV-3
0
0
1
1
0
0
0
0
1
1
0
0
0
0
0
0
0
0
0
moderate
72,464
1
37.9
0
1
1
0
0
0
1
1
0
0
1
0
0
0
9
59
42
F
0
1
farmer
rift_valley_fever
null
0
0
0
0
0
0
0
0
1
1
0
0
1
0
0
0
1
0
0
mild
121,026
0
37.1
0
1
0
0
0
0
0
0
0
0
1
0
0
0
3
60
39
F
0
1
other
dengue
DENV-3
0
0
1
1
0
0
0
0
1
1
0
0
1
0
0
1
1
0
0
severe
93,829
1
45.9
0
1
0
0
0
0
1
1
0
0
1
0
0
0
8
61
13
M
1
1
other
chikungunya
null
0
0
0
1
0
0
0
0
1
1
0
1
0
0
0
1
1
0
0
moderate
100,323
0
41
1
0
0
0
0
0
1
1
0
0
1
0
0
0
4
62
71
F
0
1
farmer
dengue
DENV-2
0
0
1
0
0
0
0
0
1
1
0
1
0
0
0
1
0
0
0
moderate
118,952
0
40
0
1
0
0
0
0
0
0
0
0
1
0
0
0
3
63
5
M
1
1
student
dengue
DENV-3
0
0
1
0
0
0
0
0
1
1
0
0
0
0
0
1
0
0
0
moderate
52,151
1
41.1
1
0
0
0
0
1
0
0
0
0
1
0
0
0
10
64
34
F
0
1
healthcare
zika
null
0
0
1
1
0
0
0
0
1
1
0
0
1
0
1
0
1
0
0
moderate
73,790
1
33.1
1
0
0
0
0
0
1
1
0
0
1
0
0
0
5
65
31
F
0
0
healthcare
zika
null
0
0
1
1
0
0
0
0
1
1
1
0
1
0
0
0
0
0
0
mild
174,251
0
33.3
0
1
0
0
0
0
0
0
0
0
1
0
0
0
16
66
44
M
0
0
student
rift_valley_fever
null
0
0
0
0
0
0
0
0
1
1
1
0
1
0
0
0
1
0
0
mild
170,263
0
33.4
0
1
0
0
0
0
0
0
0
0
0
0
0
0
5
67
20
M
0
0
other
dengue
DENV-2
0
0
1
0
0
0
0
0
1
1
1
0
1
1
0
1
1
0
0
moderate
192,382
0
37.7
1
0
0
0
0
0
1
1
0
0
0
0
0
0
9
68
11
F
1
1
student
chikungunya
null
0
0
1
1
0
0
0
0
1
1
1
1
0
0
0
0
0
0
0
mild
136,907
0
39.3
1
0
0
0
0
1
0
0
0
0
1
0
0
0
9
69
29
M
0
0
student
rift_valley_fever
null
0
0
0
1
1
0
0
0
1
1
0
0
0
0
0
0
0
0
0
moderate
128,869
0
43.2
1
0
0
0
0
1
1
0
0
0
0
0
0
0
21
70
28
M
0
1
student
chikungunya
null
0
0
1
0
1
0
0
0
1
1
0
1
1
0
0
0
0
0
0
mild
176,455
0
36.8
0
1
0
0
0
0
0
0
0
0
1
0
1
0
12
71
25
F
0
1
healthcare
chikungunya
null
0
0
1
0
0
1
0
0
1
1
1
1
0
0
0
0
0
0
0
moderate
6,864
1
43.6
0
1
0
0
0
0
1
1
0
0
1
0
0
0
3
72
1
F
1
1
manual
rift_valley_fever
null
0
0
1
1
0
0
0
0
1
1
1
0
0
0
0
1
0
0
0
mild
174,117
0
39.3
1
0
0
0
0
0
0
0
0
0
1
0
0
0
7
73
34
F
0
1
farmer
rift_valley_fever
null
0
0
1
1
0
0
0
0
1
1
0
0
0
0
0
0
0
0
0
moderate
114,649
0
43.7
0
1
0
0
0
0
1
0
0
0
1
0
0
0
5
74
27
F
0
1
healthcare
yellow_fever
null
0
0
0
0
1
1
0
0
1
1
0
0
1
0
0
1
0
0
0
mild
101,892
0
38.6
0
1
0
0
0
0
0
0
0
0
0
0
0
0
3
75
24
F
0
1
trader
dengue
DENV-2
0
0
1
1
1
0
0
0
1
1
1
1
0
1
0
0
0
0
0
mild
138,404
0
41
0
1
1
0
0
0
0
0
0
0
1
0
0
0
14
76
31
F
0
0
trader
rift_valley_fever
null
0
0
0
0
1
0
0
0
1
1
0
0
1
0
0
0
0
0
0
mild
221,087
0
43.3
0
1
0
0
0
0
0
0
0
0
1
0
0
0
3
77
27
M
0
1
other
chikungunya
null
0
0
1
1
0
0
0
0
1
0
1
1
0
0
0
1
0
0
0
mild
154,549
0
43.7
0
1
0
0
0
0
0
0
0
0
1
0
1
0
3
78
37
F
0
1
trader
rift_valley_fever
null
0
0
1
0
1
1
0
0
1
1
0
0
1
0
0
0
0
0
0
moderate
36,284
1
32.8
0
1
0
0
0
0
1
1
0
0
1
0
0
0
15
79
27
F
0
1
farmer
dengue
DENV-1
0
0
1
1
1
0
0
0
1
1
1
1
1
0
0
0
0
0
0
mild
124,826
0
42.3
1
0
0
0
0
0
0
0
0
0
0
0
0
0
8
80
39
M
0
0
farmer
yellow_fever
null
0
0
1
0
1
0
0
0
1
0
1
0
1
0
0
1
1
0
1
severe
99,575
1
38.7
1
0
0
0
0
1
0
0
0
0
1
0
0
0
6
81
15
M
0
1
farmer
dengue
DENV-2
0
0
0
1
0
0
0
0
0
0
1
0
1
0
0
0
1
0
0
mild
165,769
0
36.4
0
1
1
0
0
0
0
0
0
0
1
0
0
0
4
82
27
F
0
1
other
rift_valley_fever
null
0
0
1
0
0
0
0
0
1
0
1
0
0
0
0
0
0
1
0
severe
192,505
0
31.5
1
0
0
0
0
1
1
1
0
0
1
0
0
0
17
83
28
F
0
1
farmer
zika
null
0
0
0
1
0
0
0
0
1
1
1
0
0
0
1
1
0
0
0
mild
156,920
0
30.7
0
1
0
0
0
0
0
0
0
0
1
0
0
0
8
84
19
F
0
1
student
yellow_fever
null
0
0
0
0
1
0
0
0
1
1
1
0
1
0
0
0
0
0
0
mild
119,265
0
40.4
1
0
0
0
0
0
0
0
0
0
1
0
0
0
4
85
60
F
0
1
farmer
dengue
DENV-3
0
0
1
0
0
0
0
0
1
0
0
0
1
1
0
1
0
1
0
severe
77,811
1
45.8
1
0
0
0
0
0
1
1
0
0
1
0
0
0
6
86
31
F
0
0
other
dengue
DENV-2
0
0
1
1
1
0
0
0
1
1
1
1
1
1
0
0
1
0
0
mild
70,634
1
46.2
0
1
0
0
0
0
0
0
0
0
1
0
0
0
16
87
38
M
0
1
farmer
dengue
DENV-1
0
0
1
0
1
0
0
0
1
1
1
1
0
1
0
0
0
0
0
mild
150,535
0
46.5
0
1
0
0
0
0
0
0
0
0
1
0
0
0
19
88
35
F
0
1
student
dengue
DENV-2
0
0
1
1
1
0
0
0
1
1
1
0
0
1
0
1
1
1
0
severe
83,386
1
53.8
0
1
0
0
0
0
1
1
0
0
1
0
0
0
3
89
40
F
0
1
farmer
dengue
DENV-2
0
0
0
0
0
0
0
0
1
1
1
0
0
0
0
1
0
0
0
mild
194,775
0
38.1
0
1
0
0
0
0
0
0
0
0
1
0
0
0
10
90
51
F
0
0
farmer
zika
null
0
0
0
0
0
0
0
0
1
1
0
0
0
0
0
1
0
0
0
moderate
108,238
0
31.7
0
1
0
0
0
0
1
1
0
0
1
0
0
0
12
91
36
F
0
0
healthcare
rift_valley_fever
null
0
0
1
0
1
0
0
0
1
1
1
0
0
0
0
1
0
0
0
mild
120,200
0
36.8
0
1
0
0
0
0
0
0
0
0
0
0
0
0
5
92
51
M
0
1
farmer
dengue
DENV-4
0
0
1
1
1
0
0
0
1
1
0
1
0
0
0
1
1
0
0
severe
102,846
0
35.1
0
1
0
0
0
0
1
1
0
0
1
0
0
0
6
93
19
M
0
0
other
chikungunya
null
0
0
1
1
1
1
0
0
1
0
1
1
0
0
0
1
1
0
0
moderate
106,477
0
40.1
1
0
0
0
0
1
0
0
0
0
0
0
0
0
26
94
31
F
0
1
other
chikungunya
null
0
0
1
1
0
0
0
0
1
1
1
1
0
0
0
1
0
0
0
mild
193,626
0
51.1
0
1
0
0
0
0
0
0
0
0
0
0
0
0
3
95
31
M
0
1
healthcare
zika
null
0
0
1
0
0
1
0
0
1
1
0
0
1
0
0
0
0
0
0
mild
81,541
1
38.9
1
0
0
0
0
1
0
0
0
0
0
0
0
0
8
96
56
M
0
1
student
dengue
DENV-1
0
0
1
0
0
0
0
0
1
1
0
1
0
0
0
0
0
0
0
mild
148,177
0
37.6
0
1
1
0
0
0
0
0
0
0
1
0
0
0
9
97
26
F
0
1
manual
dengue
DENV-2
0
0
0
0
0
0
0
0
1
0
1
1
0
1
0
1
1
0
0
moderate
87,316
1
39.6
0
1
1
0
0
0
1
1
0
0
1
0
0
0
17
98
26
F
0
0
trader
rift_valley_fever
null
0
0
0
0
0
0
0
0
1
1
1
0
0
0
0
1
0
0
0
mild
206,452
0
39.6
0
1
0
0
0
0
0
0
0
0
1
0
0
0
7
99
25
M
0
1
student
chikungunya
null
0
0
1
1
0
0
0
0
1
0
0
1
0
0
0
0
1
0
0
mild
143,794
0
46.8
0
1
0
0
0
0
0
0
0
0
1
0
0
0
19
100
27
F
0
0
other
dengue
DENV-3
1
1
0
0
0
0
0
0
1
1
0
1
1
0
0
0
1
0
0
mild
201,463
0
35.9
0
1
0
0
0
0
0
0
0
0
1
0
0
0
8
End of preview. Expand in Data Studio

Dengue & Arboviral Infections Dataset

Abstract

This dataset provides 30,000 simulated arboviral infection records (10,000 per scenario) from sub-Saharan Africa. Each record contains 50+ variables including virus type (dengue, chikungunya, Zika, RVF, YF), clinical presentation, severity, diagnosis, management, and outcomes. Three settings: urban referral (0.57% CFR), district hospital (1.36%), and rural health centre (2.06%).

1. Introduction

Arboviral diseases are re-emerging in Africa with Aedes aegypti thriving in urban environments (PubMed 2022). Dengue, chikungunya, Zika, Rift Valley fever, and yellow fever all circulate in SSA but are massively underdiagnosed — often misdiagnosed as malaria. WHO reported 7.6M dengue cases globally in 2024. Clinical differentiation between arboviruses is challenging, especially where diagnostic testing is limited.

This dataset is entirely simulated. It must not be used for clinical decision-making.

2. Methodology

2.1 Parameterization

Parameter Value Source
Global dengue cases (2024) 7.6M WHO 2024
Dengue secondary infection risk Higher severity WHO
Chikungunya chronic arthralgia ~40% PMC 2021
YF CFR (severe) ~20% WHO
Misdiagnosis as malaria 12-40% PubMed 2024
Aedes urbanization Increasing PubMed 2022

2.2 Scenario Design

Scenario RDTs ELISA ICU CFR
Urban referral Yes Yes Yes 0.57%
District hospital Yes No No 1.36%
Rural health centre No No No 2.06%

3. Schema

Column Type Description
id int Unique identifier
age int Patient age
arbovirus categorical dengue / chikungunya / zika / rift_valley_fever / yellow_fever
serotype categorical DENV-1 to DENV-4 (dengue only)
secondary_dengue binary Secondary dengue infection
severity categorical mild / moderate / severe
haemorrhagic_manifestation binary Bleeding
thrombocytopenia binary Low platelets
rdt_performed binary RDT done
misdiagnosed_as_malaria binary Misdiagnosed
hospitalised binary Hospitalised
icu_admission binary ICU admission
died binary Died
chronic_arthralgia binary Chronic joint pain (chikungunya)
congenital_zika binary Congenital Zika (pregnancy)

4. Validation

Validation Report

Key validation checks:

  • Dengue: 40% of cases ✓
  • CFR gradient: 0.57% → 1.36% → 2.06% ✓
  • Misdiagnosis: 12% (urban) → 40% (rural) ✓
  • YF highest CFR among arboviruses ✓
  • Chikungunya chronic arthralgia: ~40% ✓
  • DENV-2 dominant serotype ✓

5. Usage

from datasets import load_dataset
dataset = load_dataset("electricsheepafrica/dengue-arboviral-infections", "district_hospital")
df = dataset["train"].to_pandas()

6. Limitations

  • Simulated: Not from real surveillance data.
  • No entomological data: No Aedes indices.
  • No genomic data: No viral sequencing.
  • Simplified: No detailed immune response markers.
  • No spatial data: No GPS coordinates.

7. References

  1. WHO (2024). Dengue global situation report.
  2. PMC (2021). Epidemiology of arboviruses in Africa.
  3. CDC EID (2024). Arbovirus epidemics in Africa 2023.
  4. Nature (2025). Overlapping distribution of Aedes-borne viruses.
  5. PubMed (2022). Aedes aegypti urbanization in Africa.
  6. PubMed (2016). Repetitive dengue outbreaks East Africa.
  7. PubMed (2024). DENV seroprevalence among febrile patients.

Citation

@dataset{esa_arboviral_2025,
  title={Dengue and Arboviral Infections Dataset},
  author={Electric Sheep Africa},
  year={2025},
  publisher={Hugging Face},
  url={https://huggingface.co/datasets/electricsheepafrica/dengue-arboviral-infections}
}

License

CC-BY-4.0

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