Split (1)

train · 116k rows

reference_name stringclasses 24 values	start_position int64 322 249M	end_position int64 322 249M	reference_bases stringclasses 4 values	alternate_bases stringclasses 4 values	variant_id stringlengths 8 19	allele_frequency float64 0 0.5	african_allele_frequency float64 0 0.74	european_allele_frequency float64 0 0.75	gene_symbol stringlengths 0 8	consequence stringclasses 14 values	impact stringclasses 5 values	impact_category stringclasses 4 values	is_rare bool 2 classes
chr6	88,519,805	88,519,805	T	C	chr6_88519805_T_C	0.003903	0.003168	0.004649				Unknown	true
chr17	16,364,380	16,364,380	T	A	chr17_16364380_T_A	0.049876	0.048894	0.044152	GENE987	missense_variant	MODIFIER	Low/Modifier Impact	false
chr5	70,945,747	70,945,747	A	T	rs792932204	0.044134	0.046446	0.045716	GENE1330	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr12	114,302,129	114,302,129	C	G	rs393392014	0.003928	0.005145	0.001971				Unknown	true
chr12	120,236,002	120,236,002	G	A	rs178754860	0.030533	0.026836	0.031561	GENE1128	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr11	131,291,309	131,291,309	T	G	chr11_131291309_T_G	0.03077	0.036778	0.016206	GENE1291	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chr11	20,175,036	20,175,036	T	C	chr11_20175036_T_C	0.038256	0.033918	0.019484	GENE875	missense_variant	HIGH	High Impact	false
chr3	131,847,088	131,847,088	C	G	chr3_131847088_C_G	0.003573	0.003799	0.002787				Unknown	true
chr13	38,304,635	38,304,635	G	A	rs340640199	0.369952	0.225858	0.500569	GENE836	synonymous_variant	MODERATE	Moderate Impact	false
chrY	34,827,045	34,827,045	T	G	chrY_34827045_T_G	0.020123	0.013715	0.020963	GENE923	stop_lost	MODIFIER	Low/Modifier Impact	false
chr7	57,922,089	57,922,089	G	T	chr7_57922089_G_T	0.008297	0.008572	0.007453	GENE1555	synonymous_variant	LOW	Low/Modifier Impact	true
chr4	91,279,253	91,279,253	G	A	rs839713864	0.030413	0.022965	0.015475	GENE796	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr2	36,593,828	36,593,828	A	C	rs286822241	0.031325	0.043896	0.025195	GENE420	splice_donor_variant	LOW	Low/Modifier Impact	false
chr2	198,219,820	198,219,820	A	G	rs249666368	0.015584	0.012897	0.02163	GENE967	stop_gained	LOW	Low/Modifier Impact	false
chr18	2,088,578	2,088,578	A	G	chr18_2088578_A_G	0.047068	0.039683	0.04607	GENE509	downstream_gene_variant	LOW	Low/Modifier Impact	false
chr3	174,080,073	174,080,073	A	C	rs950588121	0.001357	0.0016	0.000908				Unknown	true
chr12	115,288,099	115,288,099	A	C	rs305450520	0.000884	0.000684	0.000961	GENE895	stop_gained	MODIFIER	Low/Modifier Impact	true
chr1	161,154,686	161,154,686	A	T	rs164757590	0.032224	0.034436	0.040932	GENE1158	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr20	8,091,910	8,091,910	G	T	rs554207452	0.040829	0.030189	0.031894	GENE1200	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chrX	36,440,522	36,440,522	C	A	rs42930737	0.002682	0.002768	0.003498	GENE521	frameshift_variant	MODIFIER	Low/Modifier Impact	true
chrX	122,007,380	122,007,380	G	C	rs579021319	0.018364	0.01714	0.016077				Unknown	false
chr6	162,138,067	162,138,067	T	C	chr6_162138067_T_C	0.003881	0.002766	0.005225	GENE604	splice_acceptor_variant	LOW	Low/Modifier Impact	true
chr10	12,324,481	12,324,481	G	C	chr10_12324481_G_C	0.042851	0.055856	0.030362	GENE1508	stop_gained	MODIFIER	Low/Modifier Impact	false
chr14	39,702,081	39,702,081	C	A	rs982004597	0.028876	0.024016	0.024236				Unknown	false
chr1	225,463,026	225,463,026	A	T	rs955141690	0.020026	0.029495	0.010881	GENE563	upstream_gene_variant	MODERATE	Moderate Impact	false
chr15	6,781,853	6,781,853	T	G	rs374557432	0.032305	0.039208	0.040487				Unknown	false
chr14	45,869,971	45,869,971	T	C	rs883188105	0.03801	0.034931	0.021881				Unknown	false
chr13	71,751,824	71,751,824	A	C	rs774504757	0.031851	0.017076	0.042258	GENE1867	stop_lost	MODIFIER	Low/Modifier Impact	false
chr14	65,763,133	65,763,133	T	A	rs313049808	0.008525	0.005001	0.008745	GENE1646	synonymous_variant	MODERATE	Moderate Impact	true
chr5	78,301,673	78,301,673	G	C	chr5_78301673_G_C	0.006565	0.009678	0.00692	GENE755	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	true
chr11	32,732,395	32,732,395	A	T	chr11_32732395_A_T	0.039027	0.028628	0.046888	GENE814	synonymous_variant	MODIFIER	Low/Modifier Impact	false
chr5	143,796,987	143,796,987	T	A	rs483800060	0.013646	0.010841	0.01324	GENE1196	3_prime_UTR_variant	MODERATE	Moderate Impact	false
chr2	211,779,159	211,779,159	G	T	rs547699418	0.024121	0.0258	0.036126				Unknown	false
chr14	43,443,921	43,443,921	C	A	rs424534888	0.04373	0.032067	0.026595	GENE1893	intron_variant	LOW	Low/Modifier Impact	false
chr15	24,613,060	24,613,060	G	A	rs794136821	0.041334	0.033994	0.052782	GENE1876	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr1	99,373,050	99,373,050	T	A	rs763976185	0.035817	0.034933	0.021079				Unknown	false
chr17	71,244,773	71,244,773	A	C	rs679541083	0.025575	0.020822	0.021343				Unknown	false
chrX	131,850,846	131,850,846	C	G	chrX_131850846_C_G	0.040111	0.025811	0.053057	GENE551	start_lost	HIGH	High Impact	false
chr2	230,751,234	230,751,234	A	G	rs765799097	0.027257	0.031795	0.0267	GENE25	stop_lost	MODERATE	Moderate Impact	false
chr17	8,952,317	8,952,317	C	T	rs514115785	0.217394	0.214213	0.209706				Unknown	false
chrY	49,956,336	49,956,336	C	G	chrY_49956336_C_G	0.026082	0.026302	0.013419				Unknown	false
chr8	10,360,786	10,360,786	T	A	chr8_10360786_T_A	0.002636	0.001997	0.00381	GENE1741	5_prime_UTR_variant	LOW	Low/Modifier Impact	true
chr5	52,646,826	52,646,826	G	T	rs383097690	0.019686	0.014965	0.026276	GENE1011	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr7	101,810,094	101,810,094	C	T	rs467288402	0.015079	0.010864	0.019557	GENE463	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr15	15,325,986	15,325,986	G	A	rs714656846	0.022226	0.023812	0.015993	GENE110	synonymous_variant	MODERATE	Moderate Impact	false
chr7	74,126,087	74,126,087	A	C	chr7_74126087_A_C	0.024159	0.024146	0.027873	GENE674	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr2	122,576,410	122,576,410	C	T	rs960472153	0.047125	0.028668	0.025952	GENE234	upstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr11	118,956,565	118,956,565	A	C	chr11_118956565_A_C	0.004821	0.005839	0.005792	GENE1587	start_lost	MODERATE	Moderate Impact	true
chr1	193,555,264	193,555,264	A	T	chr1_193555264_A_T	0.029702	0.042551	0.019536	GENE1370	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr2	226,982,645	226,982,645	G	T	rs144943450	0.150914	0.225069	0.095266	GENE1780	missense_variant	MODIFIER	Low/Modifier Impact	false
chr17	18,540,263	18,540,263	G	C	chr17_18540263_G_C	0.010691	0.010388	0.00788	GENE1436	frameshift_variant	MODERATE	Moderate Impact	false
chr17	59,430,476	59,430,476	C	T	rs805314949	0.001719	0.000926	0.000887				Unknown	true
chr5	58,846,590	58,846,590	A	G	rs450489863	0.031183	0.017387	0.020539	GENE44	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chrX	16,913,506	16,913,506	G	C	chrX_16913506_G_C	0.034829	0.04306	0.042356	GENE1233	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr20	61,431,620	61,431,620	T	A	chr20_61431620_T_A	0.047985	0.060518	0.065345				Unknown	false
chr1	209,681,616	209,681,616	G	T	rs993441552	0.00964	0.008885	0.008735				Unknown	true
chr20	17,411,361	17,411,361	G	C	rs737421675	0.02978	0.030017	0.024431	GENE803	downstream_gene_variant	LOW	Low/Modifier Impact	false
chr6	76,688,032	76,688,032	G	A	rs406742214	0.038377	0.023816	0.039265	GENE526	intron_variant	LOW	Low/Modifier Impact	false
chr17	15,192,538	15,192,538	T	A	rs590903711	0.019489	0.010152	0.023656	GENE274	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr18	55,193,028	55,193,028	C	G	chr18_55193028_C_G	0.0958	0.077546	0.072556	GENE1553	downstream_gene_variant	LOW	Low/Modifier Impact	false
chr4	145,657,270	145,657,270	C	A	rs21740779	0.039221	0.046258	0.044169	GENE1677	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr6	54,544,186	54,544,186	G	A	chr6_54544186_G_A	0.043707	0.029598	0.024567				Unknown	false
chr14	80,767,520	80,767,520	C	T	rs250973665	0.001348	0.001063	0.001766	GENE1230	splice_acceptor_variant	MODERATE	Moderate Impact	true
chr1	28,698,620	28,698,620	A	G	rs740975227	0.013412	0.009902	0.016662	GENE830	3_prime_UTR_variant	MODERATE	Moderate Impact	false
chr11	127,094,046	127,094,046	C	A	chr11_127094046_C_A	0.025286	0.02443	0.012696	GENE1627	start_lost	LOW	Low/Modifier Impact	false
chrX	38,078,111	38,078,111	G	T	rs553575415	0.101622	0.053086	0.051906				Unknown	false
chr18	37,253,684	37,253,684	A	T	rs70658404	0.242219	0.173719	0.300703	GENE482	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr2	180,209,880	180,209,880	A	T	rs499461536	0.43608	0.32447	0.633038	GENE1892	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr10	26,959,704	26,959,704	C	T	rs610395812	0.117047	0.064217	0.092957				Unknown	false
chrX	137,900,359	137,900,359	C	A	rs23514423	0.007474	0.005142	0.004904				Unknown	true
chr10	117,450,379	117,450,379	T	C	rs872214678	0.048786	0.029805	0.03673	GENE10	missense_variant	LOW	Low/Modifier Impact	false
chr3	90,018,273	90,018,273	A	T	chr3_90018273_A_T	0.021642	0.022745	0.014936	GENE1692	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr1	34,788,810	34,788,810	A	G	rs551483330	0.306553	0.425431	0.253241	GENE1181	upstream_gene_variant	LOW	Low/Modifier Impact	false
chr6	159,627,831	159,627,831	T	C	chr6_159627831_T_C	0.032207	0.019911	0.030737				Unknown	false
chrY	40,700,110	40,700,110	A	C	chrY_40700110_A_C	0.315266	0.193807	0.463558	GENE429	stop_gained	LOW	Low/Modifier Impact	false
chr9	40,973,662	40,973,662	T	C	rs983238844	0.008935	0.01065	0.011532	GENE1571	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	true
chr4	69,838,400	69,838,400	A	T	rs406810405	0.011486	0.008734	0.01577				Unknown	false
chr15	56,174,612	56,174,612	C	G	rs65004211	0.017165	0.01559	0.016503				Unknown	false
chr13	69,113,814	69,113,814	C	G	rs437295693	0.190555	0.108188	0.135221	GENE51	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr3	162,952,129	162,952,129	C	G	rs937769588	0.023854	0.028673	0.017384	GENE407	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr4	54,035,691	54,035,691	T	A	rs449192742	0.498973	0.281611	0.392715	GENE1408	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr1	248,147,543	248,147,543	A	G	chr1_248147543_A_G	0.034404	0.045443	0.039869	GENE219	upstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr6	168,028,556	168,028,556	G	T	rs569414650	0.037644	0.036401	0.022225				Unknown	false
chrX	89,678,560	89,678,560	T	A	chrX_89678560_T_A	0.030061	0.027049	0.016521				Unknown	false
chr17	15,609,616	15,609,616	T	G	rs948924763	0.049121	0.055443	0.073574	GENE1024	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr15	55,328,504	55,328,504	C	T	rs44967387	0.047088	0.059038	0.066653	GENE141	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr1	143,688,675	143,688,675	C	A	rs217777287	0.337831	0.294991	0.4857	GENE706	splice_acceptor_variant	MODERATE	Moderate Impact	false
chr4	138,881,667	138,881,667	T	G	rs465831088	0.033958	0.035219	0.025455	GENE1696	stop_gained	MODERATE	Moderate Impact	false
chr1	203,449,965	203,449,965	T	G	rs586058261	0.038372	0.044666	0.040857				Unknown	false
chr11	117,031,481	117,031,481	G	T	rs389069541	0.018096	0.020962	0.020233	GENE170	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chr16	7,206,726	7,206,726	A	C	chr16_7206726_A_C	0.021114	0.026147	0.018963				Unknown	false
chr15	53,539,489	53,539,489	G	T	chr15_53539489_G_T	0.045051	0.03688	0.040688	GENE105	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr16	17,680,547	17,680,547	C	A	chr16_17680547_C_A	0.014911	0.01734	0.013087	GENE1574	frameshift_variant	LOW	Low/Modifier Impact	false
chr14	90,245,246	90,245,246	A	G	chr14_90245246_A_G	0.032042	0.020328	0.043587	GENE167	stop_gained	HIGH	High Impact	false
chr12	82,577,629	82,577,629	T	A	rs80797095	0.04536	0.061348	0.034738	GENE462	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr1	208,745,505	208,745,505	T	A	rs261238542	0.037082	0.040704	0.02947				Unknown	false
chr7	1,516,294	1,516,294	A	G	rs149456348	0.194838	0.112241	0.118704	GENE1257	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chr5	170,783,725	170,783,725	T	A	rs686768884	0.048701	0.043481	0.042112				Unknown	false
chr6	154,492,044	154,492,044	A	C	rs663003160	0.004268	0.003792	0.004461				Unknown	true
chr1	211,841,492	211,841,492	A	C	rs873256129	0.016374	0.020735	0.008339	GENE774	upstream_gene_variant	MODIFIER	Low/Modifier Impact	false

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