Split (1)

train · 116k rows

reference_name stringclasses 24 values	start_position int64 322 249M	end_position int64 322 249M	reference_bases stringclasses 4 values	alternate_bases stringclasses 4 values	variant_id stringlengths 8 19	allele_frequency float64 0 0.5	african_allele_frequency float64 0 0.74	european_allele_frequency float64 0 0.75	gene_symbol stringlengths 0 8	consequence stringclasses 14 values	impact stringclasses 5 values	impact_category stringclasses 4 values	is_rare bool 2 classes
chr1	31,455,736	31,455,736	C	A	chr1_31455736_C_A	0.035174	0.050998	0.052365	GENE1766	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr17	62,462,503	62,462,503	T	G	rs640652464	0.049612	0.043199	0.047779				Unknown	false
chrX	148,311,000	148,311,000	C	A	rs928488383	0.016379	0.02099	0.024208	GENE1845	intron_variant	LOW	Low/Modifier Impact	false
chr7	89,427,849	89,427,849	A	C	chr7_89427849_A_C	0.014308	0.017393	0.011003	GENE406	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr10	63,397,748	63,397,748	T	C	rs70613537	0.030046	0.036735	0.018706	GENE563	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr8	136,133,500	136,133,500	C	A	rs203157413	0.0443	0.05704	0.036026	GENE525	frameshift_variant	MODERATE	Moderate Impact	false
chr6	21,080,105	21,080,105	T	C	chr6_21080105_T_C	0.008581	0.00601	0.012829	GENE932	downstream_gene_variant	MODIFIER	Low/Modifier Impact	true
chr10	89,234,145	89,234,145	A	C	rs20700111	0.019628	0.014581	0.029404	GENE613	frameshift_variant	MODERATE	Moderate Impact	false
chr3	18,862,188	18,862,188	A	G	rs30372409	0.04551	0.036278	0.052619	GENE241	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr8	122,344,333	122,344,333	C	G	rs107462987	0.146696	0.078874	0.193274	GENE1072	start_lost	MODIFIER	Low/Modifier Impact	false
chr2	140,489,113	140,489,113	A	G	rs180473082	0.194114	0.201244	0.276951	GENE1862	downstream_gene_variant	LOW	Low/Modifier Impact	false
chr13	70,294,023	70,294,023	G	T	chr13_70294023_G_T	0.01597	0.022997	0.020846	GENE1675	stop_lost	MODIFIER	Low/Modifier Impact	false
chr8	102,844,267	102,844,267	A	T	rs439931228	0.046895	0.070135	0.026388	GENE1097	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr8	40,762,423	40,762,423	T	C	rs578403794	0.026737	0.039718	0.02128	GENE1685	missense_variant	MODIFIER	Low/Modifier Impact	false
chr16	71,806,974	71,806,974	C	T	chr16_71806974_C_T	0.035772	0.049007	0.05115	GENE1432	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr6	75,789,407	75,789,407	G	C	rs312979341	0.02379	0.013765	0.015303				Unknown	false
chr12	123,593,704	123,593,704	T	C	rs75489273	0.003731	0.005043	0.001938				Unknown	true
chr10	119,751,817	119,751,817	T	A	rs486984352	0.016484	0.016905	0.020993	GENE1999	missense_variant	MODIFIER	Low/Modifier Impact	false
chr14	103,678,066	103,678,066	C	T	chr14_103678066_C_T	0.043006	0.038388	0.058716				Unknown	false
chr12	119,225,139	119,225,139	A	G	chr12_119225139_A_G	0.015396	0.019192	0.014915				Unknown	false
chr2	25,418,006	25,418,006	A	C	rs494366249	0.045542	0.048808	0.042936	GENE48	splice_donor_variant	MODERATE	Moderate Impact	false
chr2	55,857,997	55,857,997	C	G	chr2_55857997_C_G	0.049788	0.030013	0.029953	GENE1369	synonymous_variant	MODIFIER	Low/Modifier Impact	false
chr8	46,277,220	46,277,220	A	C	rs501879300	0.028045	0.015633	0.024049				Unknown	false
chrX	41,256,195	41,256,195	A	C	rs200757841	0.035125	0.023808	0.050402				Unknown	false
chr2	79,021,521	79,021,521	A	G	rs437158656	0.043006	0.036957	0.040248				Unknown	false
chr1	58,212,368	58,212,368	T	G	rs311407011	0.017205	0.017111	0.023759				Unknown	false
chr13	81,954,031	81,954,031	T	G	chr13_81954031_T_G	0.011748	0.009626	0.012648				Unknown	false
chr1	105,033,323	105,033,323	G	C	chr1_105033323_G_C	0.017911	0.016753	0.020137	GENE1644	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr5	10,932,674	10,932,674	G	C	rs970433197	0.005646	0.006943	0.008103				Unknown	true
chr10	59,114,605	59,114,605	A	G	rs485475545	0.010869	0.006786	0.006295				Unknown	false
chrY	20,622,951	20,622,951	T	G	rs366260023	0.036354	0.045401	0.036306	GENE471	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chrX	39,272,945	39,272,945	G	A	chrX_39272945_G_A	0.048171	0.029524	0.040755	GENE1133	stop_gained	MODIFIER	Low/Modifier Impact	false
chr8	51,800,146	51,800,146	T	A	rs539426551	0.042889	0.062795	0.029375	NF2	stop_lost	LOW	Low/Modifier Impact	false
chr9	3,237,711	3,237,711	G	C	rs838057655	0.046667	0.055943	0.023823				Unknown	false
chr6	61,724,162	61,724,162	G	C	rs782064027	0.019875	0.025057	0.023579	GENE1052	start_lost	MODERATE	Moderate Impact	false
chr20	18,857,622	18,857,622	A	G	rs587260933	0.046601	0.025245	0.051891				Unknown	false
chr4	92,264,447	92,264,447	T	G	chr4_92264447_T_G	0.014487	0.007629	0.020433	GENE129	splice_acceptor_variant	HIGH	High Impact	false
chr1	129,511,038	129,511,038	A	C	rs57342839	0.237157	0.21468	0.232179				Unknown	false
chr6	64,577,275	64,577,275	C	T	rs989657087	0.037273	0.040064	0.025268				Unknown	false
chr11	124,934,514	124,934,514	C	A	rs386189946	0.035376	0.050744	0.022954	GENE1158	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr18	58,546,560	58,546,560	A	C	rs610743542	0.03519	0.026343	0.029439	GENE489	upstream_gene_variant	MODERATE	Moderate Impact	false
chr15	57,973,898	57,973,898	T	G	rs235283251	0.043657	0.061649	0.054815				Unknown	false
chr7	1,561,720	1,561,720	A	T	chr7_1561720_A_T	0.003697	0.003964	0.004654	GENE1652	upstream_gene_variant	LOW	Low/Modifier Impact	true
chr12	26,460,729	26,460,729	C	T	rs307765634	0.009791	0.009673	0.007887	GENE815	upstream_gene_variant	MODIFIER	Low/Modifier Impact	true
chr12	110,274,831	110,274,831	G	A	rs978009405	0.029387	0.018645	0.030844				Unknown	false
chr6	146,370,869	146,370,869	G	T	rs201741120	0.027825	0.030442	0.019224				Unknown	false
chr12	75,847,597	75,847,597	C	T	rs183000764	0.038618	0.036586	0.052437	GENE40	upstream_gene_variant	MODERATE	Moderate Impact	false
chr5	13,604,450	13,604,450	T	C	rs740531079	0.013561	0.015196	0.013147				Unknown	false
chr5	99,496,985	99,496,985	T	C	rs201884783	0.02237	0.011397	0.024769				Unknown	false
chr6	49,766,854	49,766,854	G	C	rs158135098	0.006973	0.009122	0.004673	GENE1549	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	true
chr5	133,169,008	133,169,008	G	C	chr5_133169008_G_C	0.177976	0.135163	0.096642				Unknown	false
chr6	97,583,695	97,583,695	G	C	rs261495030	0.001033	0.000858	0.000628				Unknown	true
chr5	44,471,566	44,471,566	G	T	chr5_44471566_G_T	0.025929	0.031756	0.016132	GENE412	stop_lost	MODERATE	Moderate Impact	false
chr3	88,636,663	88,636,663	T	C	chr3_88636663_T_C	0.013428	0.006838	0.019508	GENE7	missense_variant	MODIFIER	Low/Modifier Impact	false
chr1	215,342,403	215,342,403	C	T	chr1_215342403_C_T	0.007404	0.00396	0.010539	GENE265	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	true
chr15	92,859,842	92,859,842	T	G	chr15_92859842_T_G	0.025907	0.025564	0.020847	GENE957	stop_gained	LOW	Low/Modifier Impact	false
chr4	157,996,226	157,996,226	T	G	rs404442076	0.034078	0.050489	0.042319	GENE20	upstream_gene_variant	LOW	Low/Modifier Impact	false
chr2	40,476,553	40,476,553	T	C	rs59582998	0.024863	0.024372	0.012646	GENE1624	stop_lost	MODERATE	Moderate Impact	false
chr9	63,648,005	63,648,005	T	G	rs655250257	0.036802	0.046253	0.03974				Unknown	false
chr1	105,667,988	105,667,988	A	G	rs962478329	0.016619	0.011258	0.013525	GENE627	splice_acceptor_variant	HIGH	High Impact	false
chr2	84,700,929	84,700,929	C	A	chr2_84700929_C_A	0.095859	0.068191	0.072841	GENE1224	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr11	92,095,526	92,095,526	G	A	rs386801361	0.045686	0.050341	0.067074				Unknown	false
chr19	21,032,667	21,032,667	G	A	chr19_21032667_G_A	0.030602	0.017522	0.020929	GENE402	splice_donor_variant	LOW	Low/Modifier Impact	false
chr8	6,073,509	6,073,509	A	G	chr8_6073509_A_G	0.042201	0.040464	0.027701	GENE230	stop_gained	LOW	Low/Modifier Impact	false
chr13	43,419,442	43,419,442	G	C	rs528366361	0.021391	0.021929	0.010844	GENE1540	frameshift_variant	MODERATE	Moderate Impact	false
chr7	62,838,756	62,838,756	G	A	rs55645840	0.01027	0.007531	0.014933				Unknown	false
chr8	68,328,694	68,328,694	C	G	chr8_68328694_C_G	0.038413	0.030209	0.022675				Unknown	false
chr11	21,177,498	21,177,498	T	C	chr11_21177498_T_C	0.015867	0.009191	0.020042	GENE1166	stop_gained	MODERATE	Moderate Impact	false
chr5	118,312,047	118,312,047	C	A	rs406373586	0.049993	0.058163	0.032672	GENE552	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chr1	243,294,492	243,294,492	A	C	rs857036907	0.279954	0.220055	0.213553				Unknown	false
chr5	33,154,348	33,154,348	T	A	rs947304717	0.031714	0.043549	0.027819	HTT	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr6	43,911,311	43,911,311	A	T	rs531412539	0.490289	0.391838	0.438381	GENE1563	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chrX	74,514,061	74,514,061	C	G	rs88504706	0.048371	0.026456	0.07248	GENE1745	splice_donor_variant	LOW	Low/Modifier Impact	false
chr17	56,551,641	56,551,641	C	T	chr17_56551641_C_T	0.009027	0.005777	0.009079				Unknown	true
chr15	99,159,795	99,159,795	G	A	rs187357078	0.006771	0.008473	0.00532				Unknown	true
chr5	36,061,494	36,061,494	T	C	rs566160397	0.036407	0.049506	0.032788	GENE1081	start_lost	MODIFIER	Low/Modifier Impact	false
chr21	40,227,887	40,227,887	C	A	rs908999766	0.025446	0.018021	0.016343				Unknown	false
chr8	14,747,542	14,747,542	A	T	chr8_14747542_A_T	0.04212	0.027277	0.028817	GENE1909	stop_lost	MODIFIER	Low/Modifier Impact	false
chr6	19,786,195	19,786,195	A	T	rs795104405	0.049304	0.026867	0.060999	GENE673	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr5	141,223,470	141,223,470	C	G	chr5_141223470_C_G	0.04562	0.057312	0.024395				Unknown	false
chr12	66,097,185	66,097,185	C	A	chr12_66097185_C_A	0.017795	0.019671	0.011	GENE209	intron_variant	MODIFIER	Low/Modifier Impact	false
chr15	31,064,026	31,064,026	T	C	rs938938970	0.007456	0.010112	0.004805				Unknown	true
chrX	153,397,986	153,397,986	C	G	rs623662390	0.264535	0.165221	0.345485	GENE1324	frameshift_variant	MODERATE	Moderate Impact	false
chr21	9,997,456	9,997,456	G	T	rs727857219	0.026372	0.024412	0.024185	GENE303	downstream_gene_variant	LOW	Low/Modifier Impact	false
chr3	27,558,111	27,558,111	C	G	chr3_27558111_C_G	0.042446	0.063461	0.040686				Unknown	false
chr7	139,851,166	139,851,166	G	A	chr7_139851166_G_A	0.019057	0.019304	0.011546	GENE1639	upstream_gene_variant	LOW	Low/Modifier Impact	false
chr22	23,131,311	23,131,311	C	A	rs374475396	0.014269	0.018251	0.01745	GENE1260	upstream_gene_variant	LOW	Low/Modifier Impact	false
chr10	111,191,242	111,191,242	T	A	rs586751786	0.025724	0.013577	0.027813				Unknown	false
chr3	16,169,681	16,169,681	T	A	rs61260981	0.00759	0.004999	0.006564	GENE871	downstream_gene_variant	MODIFIER	Low/Modifier Impact	true
chr16	47,689,637	47,689,637	G	A	rs939405903	0.002888	0.003325	0.00314	GENE295	stop_gained	LOW	Low/Modifier Impact	true
chr18	43,882,884	43,882,884	T	G	chr18_43882884_T_G	0.046805	0.02356	0.06014	GENE203	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr4	26,415,168	26,415,168	C	G	rs68860684	0.011122	0.014548	0.015958	GENE1495	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chrX	28,359,070	28,359,070	A	T	chrX_28359070_A_T	0.018347	0.019083	0.011421				Unknown	false
chrY	47,526,689	47,526,689	C	G	rs518303367	0.025537	0.035482	0.020566				Unknown	false
chr3	30,125,745	30,125,745	C	G	chr3_30125745_C_G	0.030166	0.029941	0.037421	GENE139	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr11	55,248,347	55,248,347	A	G	chr11_55248347_A_G	0.028636	0.033721	0.024979				Unknown	false
chr11	21,823,990	21,823,990	C	A	rs798287269	0.048291	0.049124	0.041465	GENE1135	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr11	65,081,739	65,081,739	G	C	chr11_65081739_G_C	0.40918	0.264405	0.241101				Unknown	false
chr1	82,925,272	82,925,272	A	C	rs926493239	0.022147	0.013888	0.014598	GENE2	upstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr1	48,779,726	48,779,726	T	A	chr1_48779726_T_A	0.000638	0.000807	0.00089	GENE1879	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	true

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