Split (1)

train · 116k rows

reference_name stringclasses 24 values	start_position int64 322 249M	end_position int64 322 249M	reference_bases stringclasses 4 values	alternate_bases stringclasses 4 values	variant_id stringlengths 8 19	allele_frequency float64 0 0.5	african_allele_frequency float64 0 0.74	european_allele_frequency float64 0 0.75	gene_symbol stringlengths 0 8	consequence stringclasses 14 values	impact stringclasses 5 values	impact_category stringclasses 4 values	is_rare bool 2 classes
chr5	179,144,270	179,144,270	T	A	rs442082016	0.009722	0.008394	0.010102	GENE751	missense_variant	MODERATE	Moderate Impact	true
chr1	111,058,902	111,058,902	G	C	chr1_111058902_G_C	0.028968	0.017905	0.021791	GENE200	start_lost	MODIFIER	Low/Modifier Impact	false
chr13	101,332,320	101,332,320	G	T	rs649978434	0.017764	0.011469	0.014962				Unknown	false
chr21	19,176,643	19,176,643	T	G	rs60590125	0.015581	0.02031	0.013297				Unknown	false
chr1	98,969,319	98,969,319	T	A	rs150566707	0.012743	0.017124	0.007894	GENE1169	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr8	109,338,735	109,338,735	T	G	rs939206729	0.014232	0.020447	0.007288	GENE157	intron_variant	MODIFIER	Low/Modifier Impact	false
chr3	15,303,928	15,303,928	A	C	chr3_15303928_A_C	0.011083	0.007754	0.011521				Unknown	false
chr19	14,440,796	14,440,796	A	C	rs691406872	0.031544	0.029107	0.042443	GENE943	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr17	77,894,281	77,894,281	A	G	rs750776776	0.047473	0.044526	0.034146				Unknown	false
chrX	53,682,134	53,682,134	G	A	rs747235134	0.17912	0.157041	0.135976	GENE846	stop_lost	LOW	Low/Modifier Impact	false
chr16	87,809,915	87,809,915	T	G	rs470671313	0.009748	0.011878	0.007176				Unknown	true
chr2	192,483,935	192,483,935	T	C	rs509635097	0.020807	0.017813	0.021325	GENE1305	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr7	76,305,944	76,305,944	A	G	rs215084185	0.00043	0.000322	0.0003	NF1	splice_acceptor_variant	HIGH	High Impact	true
chr16	18,510,129	18,510,129	G	C	rs1156348	0.006443	0.006105	0.003466	GENE1081	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	true
chr14	65,011,451	65,011,451	G	T	chr14_65011451_G_T	0.015182	0.011337	0.019721	GENE1484	missense_variant	MODIFIER	Low/Modifier Impact	false
chr9	48,091,797	48,091,797	T	A	rs37708830	0.003973	0.005791	0.002315	GENE657	missense_variant	HIGH	High Impact	true
chrX	116,092,550	116,092,550	A	G	rs98941005	0.038207	0.045861	0.053692	FMR1	start_lost	LOW	Low/Modifier Impact	false
chr4	60,135,144	60,135,144	A	C	rs580059987	0.02167	0.013572	0.010968	GENE1481	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr12	44,747,169	44,747,169	T	A	rs396246900	0.029539	0.015432	0.039617				Unknown	false
chr9	97,144,375	97,144,375	A	G	chr9_97144375_A_G	0.006241	0.006042	0.007689				Unknown	true
chr6	160,006,433	160,006,433	C	A	rs671790726	0.035761	0.035754	0.034455	GENE403	stop_lost	MODIFIER	Low/Modifier Impact	false
chr19	23,156,492	23,156,492	C	G	chr19_23156492_C_G	0.242267	0.329596	0.230005	GENE212	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr11	28,571,368	28,571,368	T	G	rs211887578	0.041942	0.027696	0.023567				Unknown	false
chr4	156,764,825	156,764,825	C	G	chr4_156764825_C_G	0.049859	0.048533	0.060623				Unknown	false
chr10	10,705,670	10,705,670	T	C	rs452250257	0.018084	0.015005	0.01791	GENE248	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr11	38,909,714	38,909,714	T	C	rs893825266	0.025218	0.029696	0.021923	GENE1826	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr2	23,735,992	23,735,992	T	C	rs239072079	0.017061	0.013339	0.023565	GENE167	upstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr2	132,555,701	132,555,701	T	G	rs983416593	0.025476	0.034065	0.034511	GENE1558	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr1	58,199,574	58,199,574	T	A	rs580414339	0.04366	0.060576	0.030414	GENE1295	stop_lost	MODERATE	Moderate Impact	false
chr7	12,261,531	12,261,531	G	A	rs338876590	0.004538	0.005984	0.003623				Unknown	true
chr22	49,208,388	49,208,388	C	T	chr22_49208388_C_T	0.02359	0.024911	0.025878	GENE1369	frameshift_variant	HIGH	High Impact	false
chr12	81,669,634	81,669,634	G	C	rs293517262	0.013761	0.018378	0.010735	BRCA2	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr22	9,154,988	9,154,988	C	A	rs493553494	0.020963	0.014673	0.024287	GENE1005	missense_variant	MODIFIER	Low/Modifier Impact	false
chr1	33,552,019	33,552,019	A	C	rs199939548	0.283887	0.199655	0.240852	GENE275	3_prime_UTR_variant	MODERATE	Moderate Impact	false
chr3	132,166,474	132,166,474	T	C	rs787111883	0.033127	0.041007	0.040334				Unknown	false
chr2	191,717,405	191,717,405	A	C	rs640359999	0.025899	0.03422	0.025917	GENE216	stop_gained	MODIFIER	Low/Modifier Impact	false
chr3	1,843,039	1,843,039	T	A	rs675394829	0.023035	0.016741	0.01992	GENE278	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chr17	8,117,672	8,117,672	C	T	chr17_8117672_C_T	0.045417	0.061878	0.037658	GENE1422	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr14	74,178,701	74,178,701	C	A	rs550298467	0.00149	0.001563	0.001582				Unknown	true
chr8	63,253,182	63,253,182	C	T	rs447635003	0.013942	0.015586	0.012316	GENE1643	intron_variant	MODERATE	Moderate Impact	false
chr19	36,342,738	36,342,738	C	T	rs666864512	0.453776	0.487907	0.615223				Unknown	false
chr10	129,124,081	129,124,081	C	T	rs878083750	0.041285	0.049741	0.029415	GENE1425	synonymous_variant	LOW	Low/Modifier Impact	false
chr15	937,697	937,697	C	A	rs56190208	0.039909	0.049709	0.047906	GENE350	splice_donor_variant	MODIFIER	Low/Modifier Impact	false
chr15	100,460,697	100,460,697	G	A	rs824320952	0.043799	0.040276	0.03277	GENE705	start_lost	MODIFIER	Low/Modifier Impact	false
chr1	225,736,778	225,736,778	T	A	rs602051400	0.290377	0.160692	0.237235				Unknown	false
chrX	133,786,963	133,786,963	G	T	rs334695006	0.026253	0.022147	0.020043	GENE1327	synonymous_variant	LOW	Low/Modifier Impact	false
chr12	113,721,970	113,721,970	T	A	rs490545418	0.022594	0.020794	0.014316	GENE1954	splice_acceptor_variant	MODERATE	Moderate Impact	false
chr16	34,045,757	34,045,757	T	A	chr16_34045757_T_A	0.008353	0.010694	0.009134	GENE1462	splice_acceptor_variant	LOW	Low/Modifier Impact	true
chr4	32,892,973	32,892,973	A	G	rs826535008	0.04705	0.040706	0.066443	GENE263	stop_lost	LOW	Low/Modifier Impact	false
chr16	53,853,469	53,853,469	T	A	chr16_53853469_T_A	0.033791	0.017154	0.033473	GENE1260	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr13	47,333,710	47,333,710	T	A	rs611887197	0.486228	0.402984	0.378652	GENE37	downstream_gene_variant	LOW	Low/Modifier Impact	false
chr1	124,755,513	124,755,513	T	A	chr1_124755513_T_A	0.030663	0.025969	0.019297	GENE1644	start_lost	LOW	Low/Modifier Impact	false
chrX	4,878,696	4,878,696	C	G	chrX_4878696_C_G	0.035396	0.040797	0.031964	GENE969	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr7	152,033,242	152,033,242	G	T	rs165395468	0.025619	0.032075	0.03795	GENE917	intron_variant	LOW	Low/Modifier Impact	false
chrX	46,850,603	46,850,603	G	A	rs576437610	0.013018	0.012422	0.011453				Unknown	false
chr1	218,049,813	218,049,813	A	C	rs797162950	0.042991	0.053154	0.030735	GENE949	synonymous_variant	MODERATE	Moderate Impact	false
chr12	32,347,160	32,347,160	G	T	rs458466848	0.352937	0.288693	0.44451	GENE288	start_lost	MODIFIER	Low/Modifier Impact	false
chr8	69,586,358	69,586,358	C	G	rs518744035	0.213053	0.290331	0.184095	GENE477	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr1	223,029,565	223,029,565	A	G	rs807177685	0.026779	0.02042	0.016304				Unknown	false
chr20	44,013,969	44,013,969	T	C	rs463912729	0.014687	0.021185	0.021439				Unknown	false
chr7	128,559,082	128,559,082	G	T	rs638978926	0.007451	0.007013	0.005204	GENE1242	stop_gained	MODERATE	Moderate Impact	true
chr2	101,165,059	101,165,059	G	T	chr2_101165059_G_T	0.025293	0.026556	0.021206	GENE575	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr13	91,456,037	91,456,037	G	C	rs372066550	0.001246	0.001585	0.001769	GENE183	stop_lost	MODIFIER	Low/Modifier Impact	true
chr12	8,846,478	8,846,478	C	T	rs84824417	0.0389	0.049675	0.055293				Unknown	false
chr21	40,502,640	40,502,640	G	C	chr21_40502640_G_C	0.421004	0.237623	0.404661	GENE690	synonymous_variant	MODIFIER	Low/Modifier Impact	false
chr7	144,913,846	144,913,846	C	G	rs661860636	0.029891	0.020873	0.025734	GENE798	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr9	127,357,146	127,357,146	C	G	chr9_127357146_C_G	0.014143	0.007293	0.016905				Unknown	false
chrY	55,448,387	55,448,387	C	T	rs100620387	0.016053	0.015962	0.013378	GENE2	intron_variant	LOW	Low/Modifier Impact	false
chr1	152,847,774	152,847,774	A	G	rs374615517	0.003102	0.003851	0.004553	GENE1470	splice_donor_variant	MODIFIER	Low/Modifier Impact	true
chr4	88,181,554	88,181,554	T	G	rs198991747	0.007977	0.004028	0.011813	GENE998	5_prime_UTR_variant	LOW	Low/Modifier Impact	true
chr8	123,933,905	123,933,905	G	T	rs37418410	0.00812	0.011489	0.01129				Unknown	true
chr18	7,752,640	7,752,640	A	C	rs139509825	0.044452	0.023232	0.032982	GENE664	intron_variant	MODIFIER	Low/Modifier Impact	false
chr19	46,974,845	46,974,845	G	C	rs575248316	0.006135	0.007002	0.004583	GENE353	3_prime_UTR_variant	LOW	Low/Modifier Impact	true
chr7	67,829,338	67,829,338	A	T	chr7_67829338_A_T	0.002909	0.001648	0.001787				Unknown	true
chr8	34,526,903	34,526,903	C	A	rs743422347	0.030466	0.028915	0.026183	GENE1757	start_lost	MODERATE	Moderate Impact	false
chr11	56,435,441	56,435,441	T	C	rs122558313	0.016655	0.022245	0.021655	GENE868	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr2	232,795,659	232,795,659	T	A	chr2_232795659_T_A	0.025249	0.037422	0.028054				Unknown	false
chrX	35,511,592	35,511,592	C	T	chrX_35511592_C_T	0.271996	0.38116	0.356829	GENE599	missense_variant	MODERATE	Moderate Impact	false
chr3	57,582,589	57,582,589	C	A	rs491842804	0.223516	0.230115	0.320937	GENE267	splice_acceptor_variant	MODERATE	Moderate Impact	false
chr15	34,452,193	34,452,193	G	T	rs875724434	0.429915	0.445717	0.281437	GENE1764	splice_donor_variant	LOW	Low/Modifier Impact	false
chr5	168,345,307	168,345,307	T	C	rs886049184	0.005221	0.005382	0.004346				Unknown	true
chr14	9,611,068	9,611,068	A	C	rs164533300	0.007	0.009085	0.010168				Unknown	true
chr5	33,534,868	33,534,868	G	T	rs44170460	0.001819	0.001595	0.002047	GENE107	intron_variant	LOW	Low/Modifier Impact	true
chr2	133,750,398	133,750,398	A	C	chr2_133750398_A_C	0.03004	0.036623	0.043642	GENE1125	downstream_gene_variant	LOW	Low/Modifier Impact	false
chr7	39,231,570	39,231,570	A	G	chr7_39231570_A_G	0.004395	0.00388	0.005313	GENE1020	missense_variant	MODIFIER	Low/Modifier Impact	true
chr7	140,663,833	140,663,833	T	A	rs185512671	0.017435	0.00947	0.019907	GENE839	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr18	64,603,997	64,603,997	A	T	chr18_64603997_A_T	0.009413	0.005827	0.008062				Unknown	true
chr5	49,036,694	49,036,694	A	C	rs613087467	0.019254	0.018869	0.019382	GENE1093	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr22	36,019,885	36,019,885	T	G	chr22_36019885_T_G	0.010189	0.010632	0.0118				Unknown	false
chr5	28,363,223	28,363,223	G	A	rs471445455	0.035152	0.027404	0.031765	GENE893	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr8	102,448,081	102,448,081	G	A	rs455311490	0.004898	0.006917	0.003373	GENE644	start_lost	LOW	Low/Modifier Impact	true
chr2	62,975,028	62,975,028	T	A	rs197572276	0.004857	0.006828	0.004536				Unknown	true
chr10	121,239,680	121,239,680	A	C	rs173268228	0.029149	0.017003	0.042153	GENE1698	start_lost	MODERATE	Moderate Impact	false
chr10	2,557,707	2,557,707	T	A	rs877768564	0.027215	0.01853	0.035983	PRNP	frameshift_variant	MODERATE	Moderate Impact	false
chr4	7,839,077	7,839,077	T	A	chr4_7839077_T_A	0.011742	0.015213	0.009865	PARK2	frameshift_variant	LOW	Low/Modifier Impact	false
chr2	211,341,427	211,341,427	G	T	chr2_211341427_G_T	0.02818	0.031749	0.027147	GENE919	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chrX	98,227,217	98,227,217	A	G	chrX_98227217_A_G	0.039786	0.031087	0.05188	GENE424	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr2	52,715,197	52,715,197	A	C	rs436938548	0.043756	0.034116	0.024243	GENE1625	intron_variant	MODIFIER	Low/Modifier Impact	false
chr6	145,264,077	145,264,077	G	A	chr6_145264077_G_A	0.022265	0.028627	0.024536				Unknown	false
chr6	32,063,476	32,063,476	C	G	rs744906210	0.022997	0.01978	0.020769				Unknown	false

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