Split (1)

train · 116k rows

reference_name stringclasses 24 values	start_position int64 322 249M	end_position int64 322 249M	reference_bases stringclasses 4 values	alternate_bases stringclasses 4 values	variant_id stringlengths 8 19	allele_frequency float64 0 0.5	african_allele_frequency float64 0 0.74	european_allele_frequency float64 0 0.75	gene_symbol stringlengths 0 8	consequence stringclasses 14 values	impact stringclasses 5 values	impact_category stringclasses 4 values	is_rare bool 2 classes
chr1	192,479,643	192,479,643	A	T	rs517196007	0.022286	0.02622	0.018951				Unknown	false
chr4	98,400,321	98,400,321	A	C	chr4_98400321_A_C	0.003909	0.005565	0.004127				Unknown	true
chr6	114,601,374	114,601,374	G	T	rs921995627	0.011511	0.007355	0.015459				Unknown	false
chr11	92,264,051	92,264,051	C	G	rs325739637	0.025441	0.019905	0.031953	GENE1684	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr16	65,579,907	65,579,907	T	C	rs862699969	0.023557	0.031458	0.030095	GENE640	splice_donor_variant	MODERATE	Moderate Impact	false
chr9	96,690,628	96,690,628	T	A	rs442534349	0.447983	0.298508	0.415402				Unknown	false
chr14	90,248,679	90,248,679	G	C	rs143287946	0.020628	0.022735	0.024189	GENE1115	stop_lost	MODIFIER	Low/Modifier Impact	false
chr22	32,162,588	32,162,588	T	G	chr22_32162588_T_G	0.021169	0.030754	0.028745	GENE452	missense_variant	MODIFIER	Low/Modifier Impact	false
chr9	36,161,487	36,161,487	T	C	chr9_36161487_T_C	0.026366	0.026843	0.034667				Unknown	false
chr6	14,378,408	14,378,408	A	C	chr6_14378408_A_C	0.002954	0.0026	0.003697	GENE451	start_lost	LOW	Low/Modifier Impact	true
chr4	124,831,033	124,831,033	C	G	chr4_124831033_C_G	0.018637	0.013234	0.017113	GENE530	stop_gained	LOW	Low/Modifier Impact	false
chr16	65,651,287	65,651,287	A	G	rs58009132	0.046565	0.069257	0.064494	GENE7	upstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr6	98,200,068	98,200,068	A	G	chr6_98200068_A_G	0.02294	0.023274	0.022644	GENE1131	frameshift_variant	LOW	Low/Modifier Impact	false
chr1	235,191,507	235,191,507	C	T	rs168103356	0.029088	0.035203	0.01751				Unknown	false
chr15	26,610,243	26,610,243	A	G	rs132371063	0.034145	0.028689	0.033147				Unknown	false
chrX	20,422,678	20,422,678	G	A	rs494386264	0.025197	0.022289	0.017168	GENE441	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr12	62,821,536	62,821,536	T	C	rs577021446	0.038859	0.042373	0.054457	GENE986	start_lost	MODIFIER	Low/Modifier Impact	false
chr13	3,120,619	3,120,619	T	G	chr13_3120619_T_G	0.049705	0.027593	0.067661	GENE1330	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr10	48,961,771	48,961,771	T	C	rs47253232	0.045422	0.057175	0.046054	GENE1627	stop_lost	LOW	Low/Modifier Impact	false
chr8	30,321,582	30,321,582	C	A	rs746892853	0.046192	0.057486	0.068666	GENE442	intron_variant	MODERATE	Moderate Impact	false
chr7	29,075,780	29,075,780	T	A	rs762155721	0.008044	0.011533	0.008147	GENE1060	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	true
chr12	125,737,179	125,737,179	G	C	chr12_125737179_G_C	0.00295	0.003459	0.001771				Unknown	true
chr6	80,524,728	80,524,728	T	A	rs915687959	0.031557	0.021079	0.047272	GENE97	start_lost	LOW	Low/Modifier Impact	false
chr6	2,426,496	2,426,496	G	C	rs116567054	0.037595	0.048118	0.05002	GENE380	stop_lost	LOW	Low/Modifier Impact	false
chr16	8,629,890	8,629,890	A	G	chr16_8629890_A_G	0.044838	0.03724	0.028902	GENE230	upstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr22	14,815,969	14,815,969	T	A	rs931852703	0.048668	0.070809	0.044933	GENE399	upstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr7	84,124,421	84,124,421	C	T	rs139008795	0.002356	0.002584	0.001891	GENE660	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	true
chr5	75,171,762	75,171,762	A	T	chr5_75171762_A_T	0.020726	0.014043	0.019798	GENE1194	splice_acceptor_variant	MODERATE	Moderate Impact	false
chr2	199,881,038	199,881,038	C	A	rs426560180	0.004539	0.006802	0.002671				Unknown	true
chr17	12,390,853	12,390,853	A	T	chr17_12390853_A_T	0.019877	0.016069	0.028389				Unknown	false
chr11	74,398,069	74,398,069	T	C	rs427337927	0.015281	0.015437	0.018781	GENE1761	splice_donor_variant	LOW	Low/Modifier Impact	false
chrX	66,653,325	66,653,325	G	A	chrX_66653325_G_A	0.016961	0.010876	0.011802	GENE319	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr1	102,567,977	102,567,977	G	A	rs505604604	0.014517	0.01543	0.014233	GENE1897	stop_lost	MODIFIER	Low/Modifier Impact	false
chrX	98,098,864	98,098,864	C	A	rs853847931	0.329985	0.441576	0.315962				Unknown	false
chr20	27,550,634	27,550,634	T	C	rs713304304	0.005082	0.005134	0.007285				Unknown	true
chr3	21,290,590	21,290,590	A	C	rs232144941	0.04395	0.062219	0.064323	GENE735	synonymous_variant	LOW	Low/Modifier Impact	false
chr8	21,453,440	21,453,440	G	T	rs546122186	0.010723	0.007624	0.011922	GENE298	frameshift_variant	MODERATE	Moderate Impact	false
chr7	93,087,299	93,087,299	C	G	rs930730189	0.030268	0.037807	0.026339	GENE1008	synonymous_variant	LOW	Low/Modifier Impact	false
chrX	119,937,339	119,937,339	T	C	chrX_119937339_T_C	0.018247	0.013145	0.01909				Unknown	false
chr10	133,621,814	133,621,814	A	T	rs995979726	0.027885	0.038054	0.032708				Unknown	false
chr4	67,933,562	67,933,562	A	C	rs644672640	0.00472	0.006253	0.00294	KRAS	frameshift_variant	MODIFIER	Low/Modifier Impact	true
chr10	13,832,618	13,832,618	T	C	rs507230792	0.047953	0.05527	0.031185	GENE1378	stop_gained	MODIFIER	Low/Modifier Impact	false
chr18	9,358,790	9,358,790	A	G	rs972745918	0.03913	0.049007	0.027179	GENE252	upstream_gene_variant	LOW	Low/Modifier Impact	false
chr5	66,521,960	66,521,960	T	C	chr5_66521960_T_C	0.032333	0.035603	0.016242	GENE851	3_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr8	39,055,752	39,055,752	G	T	rs538199481	0.021666	0.01717	0.01251	GENE458	stop_lost	MODIFIER	Low/Modifier Impact	false
chr6	63,935,603	63,935,603	C	G	rs658167151	0.001579	0.001958	0.001847	GENE847	stop_gained	MODIFIER	Low/Modifier Impact	true
chr9	90,212,267	90,212,267	T	C	rs530487996	0.01175	0.017334	0.012194	GENE52	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr8	99,005,129	99,005,129	A	T	chr8_99005129_A_T	0.008837	0.005426	0.004685	GENE810	upstream_gene_variant	HIGH	High Impact	true
chr8	94,281,158	94,281,158	G	T	chr8_94281158_G_T	0.217447	0.305252	0.122702	GENE752	stop_gained	MODIFIER	Low/Modifier Impact	false
chr12	84,925,154	84,925,154	T	A	rs197559033	0.477219	0.635372	0.634824	GENE1495	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr9	37,033,045	37,033,045	G	A	rs902514486	0.040089	0.030326	0.028232	GENE1842	5_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr4	30,603,115	30,603,115	A	C	chr4_30603115_A_C	0.021445	0.011173	0.023133				Unknown	false
chr11	113,608,282	113,608,282	A	T	chr11_113608282_A_T	0.014373	0.014676	0.018237	GENE649	stop_gained	LOW	Low/Modifier Impact	false
chr6	169,447,568	169,447,568	A	C	rs487841656	0.237757	0.123805	0.16123				Unknown	false
chr21	7,222,080	7,222,080	G	A	rs56580802	0.03862	0.054247	0.046613	GENE1320	stop_lost	HIGH	High Impact	false
chr18	6,630,320	6,630,320	T	G	rs769651292	0.007575	0.010397	0.009564	GENE1096	stop_gained	LOW	Low/Modifier Impact	true
chr14	94,906,486	94,906,486	A	C	rs372637526	0.030882	0.020502	0.028351	GENE1280	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr12	4,664,389	4,664,389	C	G	chr12_4664389_C_G	0.04271	0.042707	0.034573	GENE776	start_lost	LOW	Low/Modifier Impact	false
chr9	103,818,327	103,818,327	A	T	chr9_103818327_A_T	0.046158	0.064443	0.031157				Unknown	false
chr21	14,078,241	14,078,241	T	C	rs991713942	0.015554	0.017341	0.008912	GENE1984	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr22	2,654,712	2,654,712	A	T	rs460916754	0.043313	0.034054	0.052941	GENE978	splice_donor_variant	MODERATE	Moderate Impact	false
chr6	155,201,817	155,201,817	G	T	rs713366961	0.004835	0.003583	0.006671	GENE752	downstream_gene_variant	LOW	Low/Modifier Impact	true
chr7	81,455,268	81,455,268	C	G	rs453801398	0.00408	0.002761	0.00562	GENE1714	downstream_gene_variant	MODIFIER	Low/Modifier Impact	true
chr4	135,072,514	135,072,514	T	G	rs279208798	0.02162	0.022107	0.021744				Unknown	false
chr2	219,119,700	219,119,700	A	G	rs591900040	0.22253	0.313441	0.289071	GENE1949	downstream_gene_variant	MODIFIER	Low/Modifier Impact	false
chr7	153,122,826	153,122,826	G	C	rs605395089	0.011306	0.011845	0.01469	GENE1227	stop_gained	LOW	Low/Modifier Impact	false
chr5	43,690,362	43,690,362	G	A	rs873142122	0.012641	0.015569	0.013934	GENE1902	start_lost	MODERATE	Moderate Impact	false
chr18	55,582,562	55,582,562	A	T	rs211073427	0.042695	0.034906	0.045152	GENE1881	synonymous_variant	MODIFIER	Low/Modifier Impact	false
chr14	94,442,873	94,442,873	G	C	rs497435346	0.010497	0.010232	0.005687	GENE662	5_prime_UTR_variant	LOW	Low/Modifier Impact	false
chr1	38,073,703	38,073,703	C	A	rs344543593	0.363021	0.452504	0.310316	GENE1116	stop_lost	MODIFIER	Low/Modifier Impact	false
chr1	58,083,965	58,083,965	C	G	rs257399618	0.470936	0.377265	0.587005	GENE498	downstream_gene_variant	MODERATE	Moderate Impact	false
chr6	101,200,679	101,200,679	T	C	rs105074122	0.109919	0.058477	0.090593				Unknown	false
chr13	259,136	259,136	T	A	rs934689721	0.033384	0.041965	0.045034	GENE595	start_lost	MODIFIER	Low/Modifier Impact	false
chr6	30,235,293	30,235,293	G	C	rs935324759	0.003558	0.00461	0.003191	GENE1567	stop_lost	MODIFIER	Low/Modifier Impact	true
chrX	127,237,130	127,237,130	T	G	rs178396166	0.011571	0.013823	0.01522				Unknown	false
chr6	140,569,710	140,569,710	T	G	rs661043256	0.03724	0.039505	0.030469	GENE621	splice_acceptor_variant	LOW	Low/Modifier Impact	false
chr9	134,109,382	134,109,382	G	A	rs744469339	0.004612	0.003764	0.003418	GENE206	splice_donor_variant	MODIFIER	Low/Modifier Impact	true
chrX	64,509,335	64,509,335	T	A	rs119239566	0.368319	0.279763	0.279251	GENE1251	start_lost	MODERATE	Moderate Impact	false
chr12	130,025,503	130,025,503	A	G	chr12_130025503_A_G	0.039243	0.044699	0.041106				Unknown	false
chr14	92,372,696	92,372,696	G	T	rs438258126	0.016389	0.01629	0.019142	GENE365	upstream_gene_variant	LOW	Low/Modifier Impact	false
chr2	47,477,821	47,477,821	A	G	chr2_47477821_A_G	0.029006	0.041162	0.021547	GENE1671	upstream_gene_variant	LOW	Low/Modifier Impact	false
chr7	17,322,602	17,322,602	A	T	rs90820666	0.017522	0.013569	0.013307	GENE350	stop_lost	LOW	Low/Modifier Impact	false
chr14	99,469,463	99,469,463	T	G	rs713814752	0.017705	0.011351	0.012281				Unknown	false
chr10	128,170,546	128,170,546	A	C	chr10_128170546_A_C	0.046973	0.028901	0.05229	GENE1880	3_prime_UTR_variant	MODIFIER	Low/Modifier Impact	false
chr1	73,917,821	73,917,821	T	C	chr1_73917821_T_C	0.022269	0.01943	0.031615				Unknown	false
chr17	60,575,135	60,575,135	A	T	rs826763533	0.047869	0.049841	0.042455	GENE1833	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr5	9,571,551	9,571,551	T	A	rs756067016	0.025334	0.017038	0.0225	GENE475	splice_acceptor_variant	MODIFIER	Low/Modifier Impact	false
chr3	183,422,157	183,422,157	G	A	rs375618289	0.020068	0.012663	0.02892	GENE336	intron_variant	MODIFIER	Low/Modifier Impact	false
chr4	52,462,827	52,462,827	G	A	rs786806142	0.008561	0.004394	0.00502	GENE138	missense_variant	MODIFIER	Low/Modifier Impact	true
chr19	53,624,647	53,624,647	G	C	rs625491236	0.006956	0.007833	0.007	GENE817	synonymous_variant	MODIFIER	Low/Modifier Impact	true
chr16	6,773,500	6,773,500	T	G	rs492322076	0.067026	0.051989	0.09786				Unknown	false
chr4	157,241,183	157,241,183	G	A	chr4_157241183_G_A	0.085384	0.047695	0.077999	GENE1415	splice_donor_variant	LOW	Low/Modifier Impact	false
chrY	36,293,749	36,293,749	C	G	rs82161592	0.002379	0.002375	0.003043				Unknown	true
chr1	3,762,524	3,762,524	T	A	rs523519416	0.013503	0.009499	0.013062	GENE1477	frameshift_variant	MODIFIER	Low/Modifier Impact	false
chr9	53,194,582	53,194,582	A	C	rs855838485	0.013161	0.019075	0.008864				Unknown	false
chr2	111,179,644	111,179,644	A	G	rs806358297	0.027118	0.035014	0.021371				Unknown	false
chr6	90,870,235	90,870,235	G	C	rs332456088	0.022831	0.028394	0.030523	GENE173	missense_variant	MODERATE	Moderate Impact	false
chr13	54,383,292	54,383,292	G	T	rs926703575	0.311114	0.182425	0.290668	GENE1982	missense_variant	MODERATE	Moderate Impact	false
chr17	49,803,918	49,803,918	G	T	rs131641306	0.225975	0.15243	0.320541				Unknown	false
chr19	56,884,095	56,884,095	T	C	chr19_56884095_T_C	0.038939	0.044554	0.047189	GENE1527	synonymous_variant	LOW	Low/Modifier Impact	false

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